RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 KIAA0319Q5VV43 1072 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 ANKRD54Q6NXT1 300 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 NT5DC4Q86YG4 428 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 SLC9A9Q8IVB4 645 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 GPR65Q8IYL9 337 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 XXYLT1Q8NBI6 393 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 BEST2Q8NFU1 509 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 DMAC2Q9NW81 257 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 TRAF3IP3Q9Y228 551 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 PPEF2O14830 753 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 SRGAP2BP0DMP2 458 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 BRCC3P46736 316 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 CYP2J2P51589 502 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 ELAVL2Q12926 359 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 SNRNP35Q16560 246 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 NFIL3Q16649 462 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 GZF1Q9H116 711 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 S1PR5Q9H228 398 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 RXFP1Q9HBX9 757 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 MAN1B1Q9UKM7 699 aa16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 USP15Q9Y4E8 981 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-219ENST00000560871 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 ZNF233A6NK53 670 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 FGFR3P22607 806 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 PRCPP42785 496 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 MYBPC2Q14324 1141 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 FAM171A1Q5VUB5 890 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 NOC3LQ8WTT2 800 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 SUSD6Q92537 303 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 CASP10Q92851 521 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 PDE11AQ9HCR9 933 aa16.78■□□□□ 0.28
RABGGTA-219ENST00000560871 I3L4J1 428 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 PIRO00625 290 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 C2CD2LO14523 706 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 CALUO43852 315 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 GPR37L1O60883 481 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 NR3C1P04150 777 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 HOXB8P17481 243 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 BMP6P22004 513 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 TKTP29401 623 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 CA8P35219 290 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 CYP24A1Q07973 514 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 SURF1Q15526 300 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 C9orf57Q5W0N0 161 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 C1orf127Q8N9H9 656 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 CXorf38Q8TB03 319 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 LNX1Q8TBB1 728 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 FAM84AQ96KN4 292 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 SUSD3Q96L08 255 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 KLHL5Q96PQ7 755 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 TTPALQ9BTX7 342 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
RABGGTA-219ENST00000560871 TSC2P49815 1807 aa16.77■□□□□ 0.27
RABGGTA-219ENST00000560871 LOC730098B7Z3J9 87 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 TEX28O15482 410 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 EXOC3O60645 756 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 ALADP13716 330 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 MORC3Q14149 939 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 PSMD6Q15008 389 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 WDR49Q8IV35 697 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 ADSSL1Q8N142 457 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 RDH13Q8NBN7 331 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 PLEKHO2Q8TD55 490 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 SLC22A17Q8WUG5 538 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 RIN2Q8WYP3 895 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 LRFN3Q9BTN0 628 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 PHF7Q9BWX1 381 aaPredicted RBP16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 MTMR12Q9C0I1 747 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 DPP3Q9NY33 737 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 FNIP2Q9P278 1114 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
RABGGTA-219ENST00000560871 M0QZQ0 153 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 SYN3O14994 580 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 SPTLC1O15269 473 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 COL9A1P20849 921 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 NR2F2P24468 414 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms