RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MEIS3P2A8K0S8 358 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 GPR182O15218 404 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TLR3O15455 904 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 NBNO60934 754 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 CST3P01034 146 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TPM1P09493 284 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 PNMA6AP0CW24 399 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 SELPP16109 830 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 ATF7P17544 494 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 AKAP5P24588 427 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 HNRNPH3P31942 346 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 PIK3CAP42336 1068 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 GUCY2FP51841 1108 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 JAM2P57087 298 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TFAMQ00059 246 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 NCBP1Q09161 790 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 FAAP100Q0VG06 881 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 PAK2Q13177 524 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 MEA1Q16626 185 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 LRRC26Q2I0M4 334 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TCTN1Q2MV58 587 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 XKR4Q5GH76 650 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TWF2Q6IBS0 349 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 SPOPLQ6IQ16 392 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 ALKAL1Q6UXT8 129 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 RRAGAQ7L523 313 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TRAPPC11Q7Z392 1133 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 APBB1IPQ7Z5R6 666 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 C1orf127Q8N9H9 656 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 OR8K1Q8NGG5 319 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 HELQQ8TDG4 1101 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 LINC01599Q8WXQ3 324 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 KAT5Q92993 513 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 PAWRQ96IZ0 340 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 KREMEN1Q96MU8 473 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 ZMAT2Q96NC0 199 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 CHP1Q99653 195 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 ASB7Q9H672 318 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 APOBEC3GQ9HC16 384 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 CHST12Q9NRB3 414 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 FAM105AQ9NUU6 356 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 RNF19AQ9NV58 838 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 RAB20Q9NX57 234 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 CNTN3Q9P232 1028 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 APEX2Q9UBZ4 518 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 SIX4Q9UIU6 781 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 DNAJC12Q9UKB3 198 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 TTC3P53804 2025 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 LTBP2Q14767 1821 aa8.73□□□□□ -1.01
DEPDC4-207ENST00000549249 SOWAHDA6NJG2 315 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TLL1O43897 1013 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TMEM191BP0C7N4 346 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 SKILP12757 684 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 CLCN1P35523 988 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 AP3M2P53677 418 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 MYL6P60660 151 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TLE2Q04725 743 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 BIRC3Q13489 604 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 BFSP2Q13515 415 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 MTF1Q14872 753 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 DRAP1Q14919 205 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TMEM132DQ14C87 1099 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 DUOXA2Q1HG44 320 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 GLRA4Q5JXX5 417 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 RAD9BQ6WBX8 426 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 CACNA2D4Q7Z3S7 1137 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 RTN4RL1Q86UN2 441 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 USP38Q8NB14 1042 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 CCDC112Q8NEF3 446 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 ANKRD36BP1Q96IX9 119 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TOX2Q96NM4 488 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 NT5C1BQ96P26 610 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 BAG1Q99933 345 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 ADAM2Q99965 735 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TRAIPQ9BWF2 469 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TRIM6Q9C030 488 aaPredicted RBP8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 WNT8AQ9H1J5 351 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 C11orf49Q9H6J7 331 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 PLEKHA5Q9HAU0 1116 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 KLK14Q9P0G3 267 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 TBX21Q9UL17 535 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 PLAGL2Q9UPG8 496 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 PCDHB2Q9Y5E7 798 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 PTPRSQ13332 1948 aa8.72□□□□□ -1.01
DEPDC4-207ENST00000549249 FNDC1Q4ZHG4 1894 aaPredicted RBP8.71□□□□□ -1.01
DEPDC4-207ENST00000549249 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 C9IYK1 514 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 F8VZ95 297 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 PTGESO14684 152 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 PPEF2O14830 753 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ZC3H11AO75152 810 aaKnown RBP eCLIP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ASS1P00966 412 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 TNNC2P02585 160 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 PLEKP08567 350 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 KCNE1P15382 129 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 RFX1P22670 979 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 GCGRP47871 477 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms