RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SUFUQ9UMX1 484 aa8.67□□□□□ -1.02
PRKAB1-207ENST00000542698 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 HNRNPCL1O60812 293 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 NCF2P19878 526 aaPredicted RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 YY1P25490 414 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 SH3BGRP55822 239 aaPredicted RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 BCAR1P56945 870 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 EIF3EP60228 445 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 RPS6P62753 249 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 ASPHQ12797 758 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 MTM1Q13496 603 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 HYIQ5T013 277 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 ERMARDQ5T6L9 678 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 NUDCD3Q8IVD9 361 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TTC16Q8NEE8 873 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 MCEEQ96PE7 176 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 UBN1Q9NPG3 1134 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 CYP26B1Q9NR63 512 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 GEMIN8Q9NWZ8 242 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TAS2R14Q9NYV8 317 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 PCDHA3Q9Y5H8 950 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 WDR46O15213 610 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 CCDC22O60826 627 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 KITP10721 976 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 CIITAP33076 1130 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 RARRES1P49788 294 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 AP3M2P53677 418 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 CDH6P55285 790 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 NOP14P78316 857 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 ZNF568Q3ZCX4 644 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 APOBEC3HQ6NTF7 200 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 LVRNQ6Q4G3 990 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 C15orf52Q6ZUT6 534 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 DEPDC1BQ8WUY9 529 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 SCYL1Q96KG9 808 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM161BQ96MY7 647 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 MRPL4Q9BYD3 311 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 HOXC10Q9NYD6 342 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 NAALADL1Q9UQQ1 740 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 APOBEC2Q9Y235 224 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 MYH10P35580 1976 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 NPTX2P47972 431 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 GPC3P51654 580 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 KCTD2Q14681 263 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TKFCQ3LXA3 575 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 ZCWPW2Q504Y3 356 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 GADL1Q6ZQY3 521 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 CENPTQ96BT3 561 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 KLF6Q99612 283 aaPredicted RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TTC1Q99614 292 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TSSK1BQ9BXA7 367 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 MOV10L1Q9BXT6 1211 aaKnown RBP8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 OSBPL1AQ9BXW6 950 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 TMX2Q9Y320 296 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 ASTN1O14525 1302 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 IGSF9BQ9UPX0 1349 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 KDM3BQ7LBC6 1761 aa8.66□□□□□ -1.02
PRKAB1-207ENST00000542698 O00370 1275 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 MAFGO15525 162 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 CST8O60676 142 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 SHBGP04278 402 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 CCNG2Q16589 344 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 KCTD19Q17RG1 926 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 WDR72Q3MJ13 1102 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM102AQ5T9C2 384 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 C1orf146Q5VVC0 180 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 DUPD1Q68J44 220 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 AADACL2Q6P093 401 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 ARHGEF19Q8IW93 802 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 ZFPM1Q8IX07 1006 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 C1orf131Q8NDD1 294 aaKnown RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 LNX1Q8TBB1 728 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 RBM46Q8TBY0 533 aaKnown RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 DHX38Q92620 1227 aaKnown RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 MKL1Q969V6 931 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 MAGEB18Q96M61 343 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC38A10Q9HBR0 1119 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 ZNF70Q9UC06 446 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 PHTF1Q9UMS5 762 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 N4BP2Q86UW6 1770 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 LMO7Q8WWI1 1683 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 KRT10P13645 584 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 KRT4P19013 534 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 CHRNA5P30532 468 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 ROR1Q01973 937 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 PPP2R5CQ13362 524 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 RAPH1Q70E73 1250 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 HIPK4Q8NE63 616 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 TMC2Q8TDI7 906 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 TAAR1Q96RJ0 339 aa8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 TARS2Q9BW92 718 aaKnown RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 RPAP3Q9H6T3 665 aaPredicted RBP8.65□□□□□ -1.02
PRKAB1-207ENST00000542698 DNAJC18Q9H819 358 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms