RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 RPL26L1Q9UNX3 145 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 GOLGA8SH3BPF8 625 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 GOLGA8MH3BSY2 632 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 C2CD2LO14523 706 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 GSC2O15499 205 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 ZBED4O75132 1171 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 ADRA1DP25100 572 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 MXI1P50539 228 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 MCL1Q07820 350 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 RASA3Q14644 834 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 FAM136AQ96C01 138 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 FAM210AQ96ND0 272 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 TUBB6Q9BUF5 446 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 UVRAGQ9P2Y5 699 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 WASF2Q9Y6W5 498 aa13.6□□□□□ -0.23
SFSWAP-209ENST00000540469 A0A1W2PPM1 405 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 TCEA3O75764 348 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 SERPINB3P29508 390 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 HOXA13P31271 388 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 VAMP7P51809 220 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 C2CD6Q53TS8 623 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 TAB3Q8N5C8 712 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 RFWD2Q8NHY2 731 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 EPS8L1Q8TE68 723 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 SH3TC2Q8TF17 1288 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 DMAP1Q9NPF5 467 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 FBXO6Q9NRD1 293 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 SENP1Q9P0U3 644 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 CCDC160A6NGH7 325 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 PIAS1O75925 651 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 MDH1BQ5I0G3 518 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 ANKMY2Q8IV38 441 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 MAML1Q92585 1016 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 CD101Q93033 1021 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 FAM192AQ9GZU8 254 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 UTRNP46939 3433 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 COL4A1P02462 1669 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 BMP3P12645 472 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 POLD1P28340 1107 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 PPP2R5CQ13362 524 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 MTM1Q13496 603 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 EPC2Q52LR7 807 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 WDR60Q8WVS4 1066 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 UBE2OQ9C0C9 1292 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 CHCHD3Q9NX63 227 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 GRID1Q9ULK0 1009 aa13.59□□□□□ -0.23
SFSWAP-209ENST00000540469 SMAPO00193 183 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TXNDC9O14530 226 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 GZMAP12544 262 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 AP1B1Q10567 949 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 LRRC36Q1X8D7 754 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 FOXB2Q5VYV0 432 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 CYP2W1Q8TAV3 490 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 C12orf65Q9H3J6 166 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 NDE1Q9NXR1 346 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 ARMCX1Q9P291 453 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 GOLGA8IPA6NC78 632 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 GOLGA8JA6NMD2 632 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 EML1O00423 815 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TP73O15350 636 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 SLC26A4O43511 780 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 CD58P19256 250 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 IVDP26440 423 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 MFAP3P55082 362 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TTC17Q96AE7 1141 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TIPINQ9BVW5 301 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 KLHL11Q9NVR0 708 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
SFSWAP-209ENST00000540469 ARHGEF35A5YM69 484 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 H3BRJ5 948 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 MAGEB2O15479 319 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 LYNP07948 512 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 NEK3P51956 506 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 NOP14P78316 857 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 GPS1Q13098 491 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 FAM20AQ96MK3 541 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 TTC25Q96NG3 672 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 STX18Q9P2W9 335 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 B2RBV5 119 aa13.57□□□□□ -0.24
SFSWAP-209ENST00000540469 TISP43B9A030 160 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms