RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TPGS2Q68CL5 300 aa19.31■□□□□ 0.68
PVT1-220ENST00000524165 SLITRK6Q9H5Y7 841 aa19.31■□□□□ 0.68
PVT1-220ENST00000524165 GTSE1Q9NYZ3 720 aa19.31■□□□□ 0.68
PVT1-220ENST00000524165 VAV3Q9UKW4 847 aa19.31■□□□□ 0.68
PVT1-220ENST00000524165 ABCA7Q8IZY2 2146 aa19.31■□□□□ 0.68
PVT1-220ENST00000524165 BPTFQ12830 3046 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 THADAQ6YHU6 1953 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 RECQL4O94761 1208 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 GJA1P17302 382 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 IGFBP6P24592 240 aaPredicted RBP19.3■□□□□ 0.68
PVT1-220ENST00000524165 CD300LGQ6UXG3 332 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 HAUS6Q7Z4H7 955 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 DEFB124Q8NES8 71 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 ASAP3Q8TDY4 903 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 PRIMPOLQ96LW4 560 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 UROC1Q96N76 676 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 LXNQ9BS40 222 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 CXCL16Q9H2A7 254 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 SNTG2Q9NY99 539 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 CEP72Q9P209 647 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 MAFFQ9ULX9 164 aa19.3■□□□□ 0.68
PVT1-220ENST00000524165 ARL2P36404 184 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 CLCNKBP51801 687 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 UPP1Q16831 310 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 C19orf48Q6RUI8 117 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 DHX32Q7L7V1 743 aaKnown RBP19.29■□□□□ 0.68
PVT1-220ENST00000524165 TTC8Q8TAM2 541 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 SHKBP1Q8TBC3 707 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 TMEM209Q96SK2 561 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 SLC32A1Q9H598 525 aa19.29■□□□□ 0.68
PVT1-220ENST00000524165 NAV2Q8IVL1 2488 aa19.28■□□□□ 0.68
PVT1-220ENST00000524165 ACACAQ13085 2346 aa19.28■□□□□ 0.68
PVT1-220ENST00000524165 GLRA2P23416 452 aa19.28■□□□□ 0.68
PVT1-220ENST00000524165 TWF1Q12792 350 aa19.28■□□□□ 0.68
PVT1-220ENST00000524165 TCEANC2Q96MN5 208 aa19.28■□□□□ 0.68
PVT1-220ENST00000524165 SLKQ9H2G2 1235 aaPredicted RBP19.28■□□□□ 0.68
PVT1-220ENST00000524165 OBP2AQ9NY56 170 aa19.28■□□□□ 0.68
PVT1-220ENST00000524165 DDX25Q9UHL0 483 aaKnown RBP19.28■□□□□ 0.68
PVT1-220ENST00000524165 H0Y626 953 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 I3L4J1 428 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 TBX3O15119 743 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 TRIM16O95361 564 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 PRKCBP05771 671 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 ARPP19P56211 112 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 PLCB2Q00722 1185 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.68
PVT1-220ENST00000524165 EPHA7Q15375 998 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 COL28A1Q2UY09 1125 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 ARID3BQ8IVW6 561 aaPredicted RBP19.27■□□□□ 0.68
PVT1-220ENST00000524165 ZFYVE19Q96K21 471 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 FAM20AQ96MK3 541 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 PPP1R10Q96QC0 940 aaKnown RBP19.27■□□□□ 0.68
PVT1-220ENST00000524165 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 SH3GLB2Q9NR46 395 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 PRMT7Q9NVM4 692 aaPredicted RBP19.27■□□□□ 0.68
PVT1-220ENST00000524165 VPS54Q9P1Q0 977 aa19.27■□□□□ 0.68
PVT1-220ENST00000524165 H7C4K7 107 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 N4BP3O15049 544 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 ZBTB39O15060 712 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 DGAT1O75907 488 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 BRCC3P46736 316 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 MRPL58Q14197 206 aaKnown RBP19.26■□□□□ 0.67
PVT1-220ENST00000524165 PTPAQ15257 358 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 FAM187BQ17R55 369 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 UAP1L1Q3KQV9 507 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 TMEM196Q5HYL7 178 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 C11orf74Q86VG3 221 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 C3orf58Q8NDZ4 430 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 LRRC3BQ96PB8 259 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 PDZD7Q9H5P4 517 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 DAXXQ9UER7 740 aaPredicted RBP19.26■□□□□ 0.67
PVT1-220ENST00000524165 EBF1Q9UH73 591 aa19.26■□□□□ 0.67
PVT1-220ENST00000524165 AFF4Q9UHB7 1163 aaKnown RBP19.26■□□□□ 0.67
PVT1-220ENST00000524165 PI4KAP42356 2102 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 NID2Q14112 1375 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 EIF4E1BA6NMX2 242 aaKnown RBP19.25■□□□□ 0.67
PVT1-220ENST00000524165 DPYSL4O14531 572 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 SYN3O14994 580 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 DCLK1O15075 740 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 RDXP35241 583 aaKnown RBP19.25■□□□□ 0.67
PVT1-220ENST00000524165 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.67
PVT1-220ENST00000524165 ITPRIPL2Q3MIP1 535 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 BBC3Q96PG8 261 aaPredicted RBP19.25■□□□□ 0.67
PVT1-220ENST00000524165 HHIPQ96QV1 700 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 LRRC3Q9BY71 257 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 RNF26Q9BY78 433 aaPredicted RBP19.25■□□□□ 0.67
PVT1-220ENST00000524165 FZD8Q9H461 694 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 KCNMB3Q9NPA1 279 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 RGL1Q9NZL6 768 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 FBXL5Q9UKA1 691 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 TPCN1Q9ULQ1 816 aa19.25■□□□□ 0.67
PVT1-220ENST00000524165 NAP1L2Q9ULW6 460 aaPredicted RBP19.25■□□□□ 0.67
PVT1-220ENST00000524165 A0A1W2PRU2 124 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 SLC37A4O43826 429 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 NLRP5P59047 1200 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 IRX4P78413 519 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 TNK2Q07912 1038 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 RNF20Q5VTR2 975 aa19.24■□□□□ 0.67
PVT1-220ENST00000524165 PMS2CLQ68D20 193 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms