RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SLC25A27O95847 323 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 RALAP11233 206 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 HUNKP57058 714 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 PDIA2Q13087 525 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 BMT2Q1RMZ1 405 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 TBC1D1Q86TI0 1168 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 ATG4AQ8WYN0 398 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 IFT122Q9HBG6 1241 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 TAS2R14Q9NYV8 317 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 LCMT1Q9UIC8 334 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SALL4Q9UJQ4 1053 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 BTAF1O14981 1849 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 RRM1P23921 792 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 GTF2A2P52657 109 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 PTENP60484 403 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 CUL2Q13617 745 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 E2F5Q15329 346 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SGSM1Q2NKQ1 1148 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SYDE1Q6ZW31 735 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 CHST13Q8NET6 341 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 LRRC15Q8TF66 581 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 RAB3IPQ96QF0 476 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 GBA2Q9HCG7 927 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 USP20Q9Y2K6 914 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 HEY1Q9Y5J3 304 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 STAMBPO95630 424 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SYF2O95926 243 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 CPP00450 1065 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SUPT20HL2P0C7V6 817 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 GTF2H1P32780 548 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 HSPA9P38646 679 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZNF157P51786 506 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 TFDP2Q14188 446 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 P3H1Q32P28 736 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 PHLDB3Q6NSJ2 640 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 CDR2LQ86X02 465 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 RCOR2Q8IZ40 523 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 PPFIBP2Q8ND30 876 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 MDM1Q8TC05 714 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 PARD3BQ8TEW8 1205 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 TTC25Q96NG3 672 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 XPO6Q96QU8 1125 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 AP5M1Q9H0R1 490 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 DDX56Q9NY93 547 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SLC8A1P32418 973 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SPARCL1Q14515 664 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 CCNYQ8ND76 341 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 PRMT1Q99873 361 aaKnown RBP11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 TMBIM4Q9HC24 238 aa11.93□□□□□ -0.5
PCDHGB4-201ENST00000519479 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 NRAPQ86VF7 1730 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 TBC1D12O60347 775 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 CIB2O75838 187 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 FAM107AO95990 144 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 FNTAP49354 379 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 AP1ARQ63HQ0 302 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 SPOPLQ6IQ16 392 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 FAF2Q96CS3 445 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 CYFIP2Q96F07 1278 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 ACP6Q9NPH0 428 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 ITGB4P16144 1822 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZC3H4Q9UPT8 1303 aaKnown RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 NUP98P52948 1817 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 CXCL11O14625 94 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 PCK1P35558 622 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 ARL4AP40617 200 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 ITGA8P53708 1063 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 TAP1Q03518 808 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 C11orf63Q6NUN7 778 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 CCDC97Q96F63 343 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 CFAP36Q96G28 342 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 RBAK-RBAKDNI3L0D1 243 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 TCF7P36402 384 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 PEX19P40855 299 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 GPAT2Q6NUI2 795 aa11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 NOP9Q86U38 636 aaKnown RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 INPP4AQ96PE3 977 aaPredicted RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 PURBQ96QR8 312 aaKnown RBP11.92□□□□□ -0.5
PCDHGB4-201ENST00000519479 NR1H3Q13133 447 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 KCNV1Q6PIU1 500 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 TGS1Q96RS0 853 aaKnown RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 NIF3L1Q9GZT8 377 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 ZC3H11AO75152 810 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 LCA5LO95447 670 aa11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 BRD2P25440 801 aaKnown RBP11.91□□□□□ -0.5
PCDHGB4-201ENST00000519479 PCGF5Q86SE9 256 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms