RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CDY2AQ9Y6F7 541 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 MYPNQ86TC9 1320 aa5.66□□□□□ -1.5
HMGB1P23-201ENST00000518743 EDC4Q6P2E9 1401 aaKnown RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 RBAK-RBAKDNI3L0D1 243 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 ELL2O00472 640 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 B3GALT2O43825 422 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 MAFO75444 373 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRNPP04156 253 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 MPOP05164 745 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 ENO2P09104 434 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZKSCAN1P17029 563 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 ITGB7P26010 798 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 HOXD10P28358 340 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 GDNFP39905 211 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 KCNQ1P51787 676 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 HK2P52789 917 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 NFATC3Q12968 1075 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 MSMPQ1L6U9 139 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 RALGPS1Q5JS13 557 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZBTB41Q5SVQ8 909 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 OLFML2BQ68BL8 750 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 C1orf228Q6PIY5 440 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 DAAM2Q86T65 1068 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 SRLQ86TD4 932 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZC3H18Q86VM9 953 aaKnown RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 VSIG10LQ86VR7 867 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 GLB1L2Q8IW92 636 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 SMAP1Q8IYB5 467 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 KIAA0319LQ8IZA0 1049 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 KRT78Q8N1N4 520 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 BCL7CQ8WUZ0 217 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 MTFMTQ96DP5 389 aaKnown RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 TSPAN17Q96FV3 270 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 VPS33BQ9H267 617 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 PCDH18Q9HCL0 1135 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 TUBD1Q9UJT1 453 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 RALYQ9UKM9 306 aaKnown RBP5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 L1RE1Q9UN81 338 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 DMTF1Q9Y222 760 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 PCDHB6Q9Y5E3 794 aa5.65□□□□□ -1.5
HMGB1P23-201ENST00000518743 CCDC189A1A4V9 331 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 LCHNA4D1U4 455 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ACOT7O00154 380 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ABLIM1O14639 778 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 PQBP1O60828 265 aaKnown RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 UBXN7O94888 489 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ARIH2O95376 493 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 HPXP02790 462 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 LPLP06858 475 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 DBHP09172 617 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 MSL3P1P0C860 447 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 RPS12P25398 132 aaKnown RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 APEX1P27695 318 aaKnown RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 TFF2Q03403 129 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 CHAF1AQ13111 956 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 SEMA5AQ13591 1074 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 GALEQ14376 348 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 POLD3Q15054 466 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 PDCD2Q16342 344 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 TMEM95Q3KNT9 176 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 INO80DQ53TQ3 878 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 FAM83BQ5T0W9 1011 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 RNF220Q5VTB9 566 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 BTNL9Q6UXG8 535 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 DPP8Q6V1X1 898 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 OVCH2Q7RTZ1 564 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 TTC7BQ86TV6 843 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 NLRX1Q86UT6 975 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 FAM126BQ8IXS8 530 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 PPM1NQ8N819 430 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 FAM156AQ8NDB6 213 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 CDK5RAP3Q96JB5 506 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZC3H10Q96K80 434 aaKnown RBP5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 FAM167AQ96KS9 214 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 CCDC138Q96M89 665 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 C11orf49Q9H6J7 331 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 GREM2Q9H772 168 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ARFGAP3Q9NP61 516 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 TNFRSF12AQ9NP84 129 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 INCENPQ9NQS7 918 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 KCMF1Q9P0J7 381 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 BTBD7Q9P203 1132 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 EBF1Q9UH73 591 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 GPR160Q9UJ42 338 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ANAPC4Q9UJX5 808 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 POLHQ9Y253 713 aa5.64□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZNF292O60281 2723 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 DDX60LQ5H9U9 1706 aaKnown RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 YDJCA8MPS7 323 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 F8W031 263 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 CUTAO60888 179 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 COBLO75128 1261 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 HTR1BP28222 390 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 TNNT2P45379 298 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 MTHFSP49914 203 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 AGFG1P52594 562 aaKnown RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 NKX3-2P78367 333 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 CDK17Q00537 523 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 MEF2AQ02078 507 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 GRIN1Q05586 938 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms