RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ZMYND10O75800 440 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 PFKFB1P16118 471 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 HOXA9P31269 272 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 OR1D2P34982 312 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 VARS2Q5ST30 1063 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 JADE1Q6IE81 842 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 SLC8B1Q6J4K2 584 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 ARMCX5Q6P1M9 558 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 OTOP3Q7RTS5 596 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 TDRD5Q8NAT2 981 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 KIAA1586Q9HCI6 787 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 MAFFQ9ULX9 164 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 CDY1Q9Y6F8 540 aa23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 MTCL1Q9Y4B5 1905 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-229ENST00000510129 TISP43B9A030 160 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 M0QZQ0 153 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 EXTL3O43909 919 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 PRPF6O94906 941 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 SPAG1Q07617 926 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 ZNF280DQ6N043 979 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 ZNF507Q8TCN5 953 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 CACTINQ8WUQ7 758 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 SMG7Q92540 1137 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 FAM213AQ9BRX8 229 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 PRKD2Q9BZL6 878 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 EPHX3Q9H6B9 360 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 PIDD1Q9HB75 910 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 TSHZ2Q9NRE2 1034 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 CGNQ9P2M7 1197 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 HPSEQ9Y251 543 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 VWA8A3KMH1 1905 aa23.12■■□□□ 1.29
UBE2D3-229ENST00000510129 FAM237AA0A1B0GTK4 181 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 I3L4J1 428 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 GPR37L1O60883 481 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 POU2F2P09086 479 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 SYKP43405 635 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 AFMP43652 599 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 AARSP49588 968 aaKnown RBP eCLIP23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 EHHADHQ08426 723 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 PSMD2Q13200 908 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 MRPL58Q14197 206 aaKnown RBP23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 TMEM31Q5JXX7 168 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 CRELD2Q6UXH1 353 aaPredicted RBP23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 EPM2AIP1Q7L775 607 aaPredicted RBP23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 ZDHHC14Q8IZN3 488 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 GPD1LQ8N335 351 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 ZNF461Q8TAF7 563 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 SERTAD1Q9UHV2 236 aa23.11■■□□□ 1.29
UBE2D3-229ENST00000510129 A0A1B0GVL5 298 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 ACTN4O43707 911 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 XYLBO75191 536 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 NFICP08651 508 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 WEE2P0C1S8 567 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 SPATA31D3P0C874 917 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 SURF1Q15526 300 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 CTXN3Q4LDR2 81 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 PPM1LQ5SGD2 360 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 TPGS2Q68CL5 300 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 DSTYKQ6XUX3 929 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 SPATA31D4Q6ZUB0 917 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 HS2ST1Q7LGA3 356 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 USP37Q86T82 979 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 BRSK2Q8IWQ3 736 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 KHSRPQ92945 711 aaKnown RBP eCLIP23.1■■□□□ 1.293e-7■■■□□ 17.8
UBE2D3-229ENST00000510129 CCDC47Q96A33 483 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 PAGE5Q96GU1 130 aa23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 WDR6Q9NNW5 1121 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 RBAKQ9NYW8 714 aaPredicted RBP23.1■■□□□ 1.29
UBE2D3-229ENST00000510129 OAZ2O95190 189 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 C8AP07357 584 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 TYMPP19971 482 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 ELF1P32519 619 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 PNPLA4P41247 253 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 YWHAHQ04917 246 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 C9orf57Q5W0N0 161 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 KANK3Q6NY19 840 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 GOLGA5Q8TBA6 731 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 FGFBP2Q9BYJ0 223 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 BLZF1Q9H2G9 400 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 DPP3Q9NY33 737 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 MUTYHQ9UIF7 546 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 DSEQ9UL01 958 aa23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 SPTBN5Q9NRC6 3674 aaKnown RBP23.09■■□□□ 1.29
UBE2D3-229ENST00000510129 ANO9A1A5B4 782 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 PIRO00625 290 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 TBC1D4O60343 1298 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 RFPL2O75678 378 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 ODC1P11926 461 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 IGFBP6P24592 240 aaPredicted RBP23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 LILRA4P59901 499 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 CUL4BQ13620 913 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 BMT2Q1RMZ1 405 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 SAAL1Q96ER3 474 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 ZNF560Q96MR9 790 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 CBWD1Q9BRT8 395 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 EXOC1Q9NV70 894 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 FBXL5Q9UKA1 691 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 DENND4AQ7Z401 1863 aa23.08■■□□□ 1.29
UBE2D3-229ENST00000510129 CLUHO75153 1309 aa23.08■■□□□ 1.28
UBE2D3-229ENST00000510129 GOLGA6L4A6NEF3 574 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms