RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TESQ9UGI8 421 aaKnown RBP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 CDYLQ9Y232 598 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 MTO1Q9Y2Z2 717 aaKnown RBP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 SGTAO43765 313 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 ERN1O75460 977 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 HKR1P10072 659 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 TGM1P22735 817 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 CLK3P49761 638 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 MXRA7P84157 204 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 DSC2Q02487 901 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 PABPC1LQ4VXU2 614 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 UTP14CQ5TAP6 766 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 ABHD17BQ5VST6 288 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 FOXR2Q6PJQ5 311 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 OLFML1Q6UWY5 402 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 GADL1Q6ZQY3 521 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 Q8NA96 180 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 NSUN7Q8NE18 718 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 TMIEQ8NEW7 156 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 NSUN6Q8TEA1 469 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 NUP133Q8WUM0 1156 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 KLHL32Q96NJ5 620 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 PRDM13Q9H4Q3 707 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 UNKLQ9H9P5 680 aaKnown RBP4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 GALNT9Q9HCQ5 603 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 HOMER2Q9NSB8 354 aa4.53□□□□□ -1.68
HMGB1P29-201ENST00000505659 KIAA0355O15063 1070 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 RHOBTB3O94955 611 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 NUDT3O95989 172 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 MTHFD1P11586 935 aaKnown RBP4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 FDXRP22570 491 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 CCND1P24385 295 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 ADRA1BP35368 520 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 MPLP40238 635 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 PTH2RP49190 550 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 VAV2P52735 878 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 ADKP55263 362 aaKnown RBP4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 PURAQ00577 322 aaKnown RBP4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 RAB39AQ14964 217 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 KHDC1Q4VXA5 237 aaKnown RBP4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 DNAJC10Q8IXB1 793 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 BOD1Q96IK1 185 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 PNKPQ96T60 521 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 PACSIN1Q9BY11 444 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 TMEM74BQ9NUR3 256 aa4.52□□□□□ -1.69
HMGB1P29-201ENST00000505659 ANKRD62A6NC57 917 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 F2RL2O00254 374 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 SLC43A1O75387 559 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 MALP21145 153 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 AVPR1BP47901 424 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 MC2RQ01718 297 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 TAP1Q03518 808 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 SNAPC2Q13487 334 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 ATP2B3Q16720 1220 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 ARMC6Q6NXE6 501 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZNF365Q70YC5 407 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 CATIPQ7Z7H3 387 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 IL17RDQ8NFM7 739 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 NLGN4YQ8NFZ3 816 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 SSH3Q8TE77 659 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 FUBP1Q96AE4 644 aaKnown RBP4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 TMEM125Q96AQ2 219 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 LRIG1Q96JA1 1093 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 COQ10AQ96MF6 247 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 IMPG2Q9BZV3 1241 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 CASS4Q9NQ75 786 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZNHIT2Q9UHR6 403 aa4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 CFAP20Q9Y6A4 193 aaKnown RBP4.51□□□□□ -1.69
HMGB1P29-201ENST00000505659 MAST3O60307 1309 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 NT5C1B-RDH14C9J2C7 533 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 E9PLN8 166 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 MGST3O14880 152 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 ESRRBO95718 433 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 RECQLP46063 649 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 MPP3Q13368 585 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 SLC4A10Q6U841 1118 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 Q6ZNX1 250 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 FAM177A1Q8N128 213 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 FAM43AQ8N2R8 423 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 MIER2Q8N344 545 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 PDPRQ8NCN5 879 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 SLC17A8Q8NDX2 589 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 ZCRB1Q8TBF4 217 aaKnown RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 FBXO41Q8TF61 875 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 PTCD3Q96EY7 689 aaKnown RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 CRAMP1Q96RY5 1269 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 VKORC1Q9BQB6 163 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 C1orf43Q9BWL3 253 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 ALG13Q9NP73 1137 aaKnown RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 TBCCD1Q9NVR7 557 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 MRPS18AQ9NVS2 196 aaKnown RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 CALCOCO1Q9P1Z2 691 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 CTTNBP2NLQ9P2B4 639 aa4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 LUC7L2Q9Y383 392 aaKnown RBP4.5□□□□□ -1.69
HMGB1P29-201ENST00000505659 SNUPNO95149 360 aaKnown RBP4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 CXCR5P32302 372 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 PHKA1P46020 1223 aa4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 PSMC1P62191 440 aaKnown RBP4.49□□□□□ -1.69
HMGB1P29-201ENST00000505659 SF3B3Q15393 1217 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms