RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 PNMA8AQ86V59 439 aaPredicted RBP6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 NLGN4YQ8NFZ3 816 aaPredicted RBP6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 NUP133Q8WUM0 1156 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 COQ10AQ96MF6 247 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 CRAMP1Q96RY5 1269 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 DMRTA2Q96SC8 542 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 ASPSCR1Q9BZE9 553 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 PRDM13Q9H4Q3 707 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 GALNT9Q9HCQ5 603 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 PCDH12Q9NPG4 1184 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 TMEM74BQ9NUR3 256 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 ZNHIT2Q9UHR6 403 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 SLC45A2Q9UMX9 530 aa6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 MTO1Q9Y2Z2 717 aaKnown RBP6.18□□□□□ -1.42
UBE2D3-218ENST00000505009 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 HAUS5O94927 633 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 AGFG2O95081 481 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 CD1AP06126 327 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 FDXRP22570 491 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 UAP1L1Q3KQV9 507 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 PPP4R3AQ6IN85 833 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 FOXR2Q6PJQ5 311 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 Q8NA96 180 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 FUBP1Q96AE4 644 aaKnown RBP6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 BOD1Q96IK1 185 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 CLPTM1LQ96KA5 538 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 BRINP2Q9C0B6 783 aa6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 UNKLQ9H9P5 680 aaKnown RBP6.17□□□□□ -1.42
UBE2D3-218ENST00000505009 ZRANB2O95218 330 aaKnown RBP eCLIP6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 IBSPP21815 317 aaPredicted RBP6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 PTH2RP49190 550 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 TLE1Q04724 770 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 PABPC1LQ4VXU2 614 aaKnown RBP6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 UTP14CQ5TAP6 766 aaKnown RBP6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 EFCAB2Q5VUJ9 269 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 FAM43AQ8N2R8 423 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 PNKPQ96T60 521 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 SLC13A1Q9BZW2 595 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 RIOX1Q9H6W3 641 aa6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.16□□□□□ -1.42
UBE2D3-218ENST00000505009 SGTAO43765 313 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 ESRRBO95718 433 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 VAV2P52735 878 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 MPP3Q13368 585 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 KLHL32Q96NJ5 620 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 VRK1Q99986 396 aaPredicted RBP6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 ALG13Q9NP73 1137 aaKnown RBP6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 CDYLQ9Y232 598 aa6.15□□□□□ -1.42
UBE2D3-218ENST00000505009 MAST3O60307 1309 aa6.15□□□□□ -1.43
UBE2D3-218ENST00000505009 LRRC14BA6NHZ5 514 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 ZAR1LA6NP61 321 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 MTHFD1P11586 935 aaKnown RBP6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 CCND1P24385 295 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 DSC2Q02487 901 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 Q6ZNX1 250 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 GADL1Q6ZQY3 521 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 NSUN7Q8NE18 718 aaKnown RBP6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 TMIEQ8NEW7 156 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 IL17RDQ8NFM7 739 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 PTCD3Q96EY7 689 aaKnown RBP6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 GPATCH3Q96I76 525 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 CASS4Q9NQ75 786 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 TBCCD1Q9NVR7 557 aa6.14□□□□□ -1.43
UBE2D3-218ENST00000505009 MGST3O14880 152 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 CXCR5P32302 372 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 ADKP55263 362 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 RAB39AQ14964 217 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 KHDC1Q4VXA5 237 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 PRR16Q569H4 304 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 NSUN6Q8TEA1 469 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 MED15Q96RN5 788 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 PACSIN1Q9BY11 444 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 JKAMPQ9P055 326 aa6.13□□□□□ -1.43
UBE2D3-218ENST00000505009 MYADML2A6NDP7 307 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 PPFIA2O75334 1257 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 SLC43A1O75387 559 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 SNAPC2Q13487 334 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 BRDTQ58F21 947 aaPredicted RBP6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 ZNF365Q70YC5 407 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 SIMC1Q8NDZ2 872 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 SSH3Q8TE77 659 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 TMEM125Q96AQ2 219 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 LRIG1Q96JA1 1093 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 AIFM2Q9BRQ8 373 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 R3HDMLQ9H3Y0 253 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 MAN1C1Q9NR34 630 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 CALCOCO1Q9P1Z2 691 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 CTTNBP2NLQ9P2B4 639 aa6.12□□□□□ -1.43
UBE2D3-218ENST00000505009 F2RL2O00254 374 aa6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 MALP21145 153 aa6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 FXR1P51114 621 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 MC2RQ01718 297 aa6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 SF3B3Q15393 1217 aaKnown RBP6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 PTPROQ16827 1216 aa6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
UBE2D3-218ENST00000505009 SLC9A6Q92581 669 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms