RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 DNAJC7Q99615 494 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 WDR72Q3MJ13 1102 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 IER5Q5VY09 327 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 LMBRD2Q68DH5 695 aaPredicted RBP17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 HBP1O60381 514 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 SGSM1Q2NKQ1 1148 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 NDUFAF2Q8N183 169 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 ICA1LQ8NDH6 482 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 IFT43Q96FT9 208 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 OLFM3Q96PB7 478 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 KCNH4Q9UQ05 1017 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 TMX2Q9Y320 296 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 FAM47DPA6NHR8 397 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 MSH4O15457 936 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 DYNC1LI2O43237 492 aaPredicted RBP17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 PGM1P36871 562 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 OR2W6PQ8NHA6 318 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 SH2D3AQ9BRG2 576 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 ZBED2Q9BTP6 218 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 YY1AP1Q9H869 796 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 PSMC3IPQ9P2W1 217 aaPredicted RBP17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 NEU2Q9Y3R4 380 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
HMGXB3-202ENST00000503427 POU5F1BQ06416 359 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 PIGHQ14442 188 aaPredicted RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 FRA10AC1Q70Z53 315 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ERAP1Q9NZ08 941 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 PIN4Q9Y237 131 aaKnown RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 ALG6Q9Y672 507 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 KIF1AQ12756 1690 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 CCL15-CCL14A0A0B4J2E2 113 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 PIK3R2O00459 728 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 PPP1R12AO14974 1030 aaPredicted RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 FAM107AO95990 144 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ARHGDIAP52565 204 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 CCL15Q16663 113 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 SLC26A7Q8TE54 656 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 CPA5Q8WXQ8 436 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ZFYVE28Q9HCC9 887 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ADA2Q9NZK5 511 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ZFATQ9P243 1243 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17■□□□□ 0.31
HMGXB3-202ENST00000503427 GAS2O43903 313 aaKnown RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 ACTR2P61160 394 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ACER1Q8TDN7 264 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 FAM129AQ9BZQ8 928 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 CYP4F11Q9HBI6 524 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 DBR1Q9UK59 544 aaKnown RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 COMTP21964 271 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 SREBF1P36956 1147 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 ACOT2P49753 483 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 HIC1Q14526 733 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 MAPRE2Q15555 327 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 PLA2G4FQ68DD2 849 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 CAPRIN2Q6IMN6 1127 aaKnown RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 C9orf72Q96LT7 481 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 TMEM117Q9H0C3 514 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 RANBP17Q9H2T7 1088 aaKnown RBP17■□□□□ 0.31
HMGXB3-202ENST00000503427 PCDHB2Q9Y5E7 798 aa17■□□□□ 0.31
HMGXB3-202ENST00000503427 RNF103-CHMP3A0A140T963 221 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 IL18RAPO95256 599 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 CYP11B2P19099 503 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 ZNF157P51786 506 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 ERVK-24P63145 666 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 DYNC1I2Q13409 638 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 NCOA4Q13772 614 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 FAM83AQ86UY5 434 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 PRMT7Q9NVM4 692 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 FBXW10Q5XX13 1052 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 MTHFD1LQ6UB35 978 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 SMAPO00193 183 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 H2AFXP16104 143 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 ADORA2BP29275 332 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 TRPM8Q7Z2W7 1104 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 PID1Q7Z2X4 250 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 TSSK1BQ9BXA7 367 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 ING2Q9H160 280 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 AGAP1Q9UPQ3 857 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 SLC37A4O43826 429 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 LAMC2Q13753 1193 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 RIBC1Q8N443 379 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 CDC26Q8NHZ8 85 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 NCLNQ969V3 563 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 OSBPL8Q9BZF1 889 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 CARD9Q9H257 536 aa16.99■□□□□ 0.31
HMGXB3-202ENST00000503427 ARHGAP10A1A4S6 786 aa16.98■□□□□ 0.31
HMGXB3-202ENST00000503427 TRIM66O15016 1216 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms