RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZNF806P0C7X5 589 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 MYL4P12829 197 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 LIG1P18858 919 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 PSMA5P28066 241 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 HOXA6P31267 233 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 STK3Q13188 491 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 TEAD2Q15562 447 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 STPG1Q5TH74 334 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 CSGALNACT1Q8TDX6 532 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 ZNF274Q96GC6 653 aaPredicted RBP17.18■□□□□ 0.34
HDAC6-236ENST00000498808 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 FBXL5Q9UKA1 691 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 PCDHA12Q9UN75 941 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 EPN2O95208 641 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 KCNK5O95279 499 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 TWF1Q12792 350 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 MRPL58Q14197 206 aaKnown RBP17.17■□□□□ 0.34
HDAC6-236ENST00000498808 DCAF4L1Q3SXM0 396 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 IQCEQ6IPM2 695 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 C1orf228Q6PIY5 440 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 ELMOD1Q8N336 334 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 SHKBP1Q8TBC3 707 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 ZNF512Q96ME7 567 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-236ENST00000498808 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
HDAC6-236ENST00000498808 C8orf33Q9H7E9 229 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-236ENST00000498808 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-236ENST00000498808 ASPMQ8IZT6 3477 aa17.17■□□□□ 0.34
HDAC6-236ENST00000498808 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 MYBPHLA2RUH7 354 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 C1QTNF9BB2RNN3 333 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 SPECC1L-ADORA2AF8WAN1 911 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 SYN3O14994 580 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 CHADO15335 359 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 DTNBO60941 627 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 C1QTNF9P0C862 333 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 SPATA31C1P0DKV0 1188 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 XRCC6P12956 609 aaKnown RBP eCLIP17.16■□□□□ 0.34
HDAC6-236ENST00000498808 ATP2B1P20020 1258 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 CTHP32929 405 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 RAP1GAPP47736 663 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 KPNA1P52294 538 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-236ENST00000498808 FCHO2Q0JRZ9 810 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 DGKKQ5KSL6 1271 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 TPGS2Q68CL5 300 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
HDAC6-236ENST00000498808 RUFY3Q7L099 469 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 CEP120Q8N960 986 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 LEMD2Q8NC56 503 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 LOXL4Q96JB6 756 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 KIFC3Q9BVG8 833 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
HDAC6-236ENST00000498808 SMOC1Q9H4F8 434 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 ASAH2Q9NR71 780 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 ZMIZ1Q9ULJ6 1067 aa17.16■□□□□ 0.34
HDAC6-236ENST00000498808 IGF2RP11717 2491 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 H7C4K7 107 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 PODXLO00592 558 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 NAMPTP43490 491 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 NR5A1Q13285 461 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 CCINQ13939 588 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 CALCRLQ16602 461 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 XKR4Q5GH76 650 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 PLA2G2CQ5R387 149 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 UNQ6494/PRO21346Q6UXR6 183 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 YAF2Q8IY57 180 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 TTC8Q8TAM2 541 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 GAB3Q8WWW8 586 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 E2F7Q96AV8 911 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
HDAC6-236ENST00000498808 FASNP49327 2511 aaKnown RBP17.15■□□□□ 0.34
HDAC6-236ENST00000498808 SPEGQ15772 3267 aa17.15■□□□□ 0.34
HDAC6-236ENST00000498808 WNT7AO00755 349 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 EXTL3O43909 919 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 TXKP42681 527 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 PXNP49023 591 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-236ENST00000498808 PON2Q15165 354 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 CTXN3Q4LDR2 81 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 ATF7IP2Q5U623 682 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 ALKAL1Q6UXT8 129 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 RALGPS2Q86X27 583 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-236ENST00000498808 TMC8Q8IU68 726 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 GPIHBP1Q8IV16 184 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 DEPTORQ8TB45 409 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 TNFRSF25Q93038 417 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 ZFYVE19Q96K21 471 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
HDAC6-236ENST00000498808 LRRC3BQ96PB8 259 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 LRRC3Q9BY71 257 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 GPR88Q9GZN0 384 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 EML5Q05BV3 1969 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 ZZEF1O43149 2961 aa17.14■□□□□ 0.33
HDAC6-236ENST00000498808 KIF26AQ9ULI4 1882 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-236ENST00000498808 A0A1W2PRU2 124 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms