RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 BTG3Q14201 252 aaPredicted RBP13.4□□□□□ -0.26
SNX17-208ENST00000493711 SHHQ15465 462 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 IQCDQ96DY2 449 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 FAM81BQ96LP2 452 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 ZNF560Q96MR9 790 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 VPS16Q9H269 839 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 STK39Q9UEW8 545 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 VCANP13611 3396 aa13.4□□□□□ -0.26
SNX17-208ENST00000493711 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 A0A1W2PQC6 194 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 TLL1O43897 1013 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 ALDH2P05091 517 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 P4HA1P13674 534 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 LAG3P18627 525 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 PIK3CAP42336 1068 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 WNT7BP56706 349 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 UBXN1Q04323 297 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 NCOA4Q13772 614 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 NAB2Q15742 525 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 EXOC3L4Q17RC7 722 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 TDRD10Q5VZ19 366 aaKnown RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 APTXQ7Z2E3 356 aaKnown RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 C1orf127Q8N9H9 656 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 RC3H2Q9HBD1 1191 aaKnown RBP13.39□□□□□ -0.27
SNX17-208ENST00000493711 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
SNX17-208ENST00000493711 FSD2A1L4K1 749 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 TMEM189-UBE2V1I3L0A0 370 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 ITGB3P05106 788 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 KRT19P08727 400 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 PPM1AP35813 382 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
SNX17-208ENST00000493711 MRE11P49959 708 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 PLCB2Q00722 1185 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 NR1I3Q14994 352 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 RAB30Q15771 203 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 SV2CQ496J9 727 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
SNX17-208ENST00000493711 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 COLGALT2Q8IYK4 626 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 EHBP1Q8NDI1 1231 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 FAM124BQ9H5Z6 455 aaPredicted RBP13.38□□□□□ -0.27
SNX17-208ENST00000493711 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 IFNKQ9P0W0 207 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 PLAGL2Q9UPG8 496 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 FAN1Q9Y2M0 1017 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 ALPK3Q96L96 1907 aa13.38□□□□□ -0.27
SNX17-208ENST00000493711 LTBP2Q14767 1821 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 PODXLO00592 558 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 PIRO00625 290 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 RFX1P22670 979 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 POLR2BP30876 1174 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 TAF6P49848 677 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 AFF1P51825 1210 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 UPP1Q16831 310 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 PAN2Q504Q3 1202 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 SPOUT1Q5T280 376 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 TTC39CQ8N584 583 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 TAS1R2Q8TE23 839 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms