RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 OSBPL1AQ9BXW6 950 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.49
SMPD4-218ENST00000482171 ZBED1O96006 694 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 GTF2H1P32780 548 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 CDK17Q00537 523 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 LGSNQ5TDP6 509 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 ARMCX2Q7L311 632 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 IRF2BP1Q8IU81 584 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 ACSF2Q96CM8 615 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-218ENST00000482171 SHISA4Q96DD7 197 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 CDCA5Q96FF9 252 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 PRMT1Q99873 361 aaKnown RBP11.96□□□□□ -0.49
SMPD4-218ENST00000482171 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 ALS2Q96Q42 1657 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 GRIN3BO60391 1043 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 PFDN1O60925 122 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 TJP3O95049 919 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 CYP3A4P08684 503 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 GNAT1P11488 350 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 SCN4BQ8IWT1 228 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 RHOT1Q8IXI2 618 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 TATDN2Q93075 761 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 SAYSD1Q9NPB0 183 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 ACP6Q9NPH0 428 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 KLK14Q9P0G3 267 aa11.96□□□□□ -0.5
SMPD4-218ENST00000482171 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 ZNF286BP0CG31 522 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 BRAFP15056 766 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 RAD23BP54727 409 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 TMEM132BQ14DG7 1078 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 GEN1Q17RS7 908 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 CBWD6Q4V339 395 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 CBWD3Q5JTY5 395 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 GNASQ5JWF2 1037 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 CBWD5Q5RIA9 395 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 CCDC117Q8IWD4 279 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 SUGP1Q8IWZ8 645 aaKnown RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 KAT5Q92993 513 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 MCEEQ96PE7 176 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 XPO6Q96QU8 1125 aaKnown RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 EXOC1LA0A1B0GW35 172 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 CFAP73A6NFT4 308 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 F8VZ95 297 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 SYF2O95926 243 aaKnown RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 KRT3P12035 628 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 SDC4P31431 198 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 TMEM132DQ14C87 1099 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 PPP1R2P3Q6NXS1 205 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 VSIG10LQ86VR7 867 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 COPS5Q92905 334 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 WNT8AQ9H1J5 351 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 NOD2Q9HC29 1040 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 FRMPD4Q14CM0 1322 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 TCP11X1B4DZS4 312 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 PODXLO00592 558 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 INHBAP08476 426 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 FGFR4P22455 802 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 ALDH5A1P51649 535 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 COG7P83436 770 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 AMHR2Q16671 573 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 GJC2Q5T442 439 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 GPAT2Q6NUI2 795 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 SLC47A2Q86VL8 602 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 TMEM139Q8IV31 216 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 RBM41Q96IZ5 413 aaKnown RBP11.95□□□□□ -0.5
SMPD4-218ENST00000482171 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
SMPD4-218ENST00000482171 ITGB3P05106 788 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 TMEM253P0C7T8 217 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 ERFP50548 548 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 SGSM1Q2NKQ1 1148 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 LRRC23Q53EV4 343 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 ARSHQ5FYA8 562 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CYP4A22Q5TCH4 519 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 DNAAF3Q8N9W5 541 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 TPCN2Q8NHX9 752 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 SYN2Q92777 582 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CYTH2Q99418 400 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 VPS33BQ9H267 617 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 GBA2Q9HCG7 927 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 ANKRD63C9JTQ0 380 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
SMPD4-218ENST00000482171 LCP1P13796 627 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 HSD17B3P37058 310 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 PSMC4P43686 418 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 DLG4P78352 724 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 SMTNL2Q2TAL5 461 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 CASKIN2Q8WXE0 1202 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 HSD17B14Q9BPX1 270 aa11.94□□□□□ -0.5
SMPD4-218ENST00000482171 C17orf75Q9HAS0 396 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms