RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MAP3K10Q02779 954 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 MTMR2Q13614 643 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 LRRC14Q15048 493 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 CGB2Q6NT52 195 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 NSMFQ6X4W1 530 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 INTS8Q75QN2 995 aaKnown RBP13.83□□□□□ -0.2
CCNL1-216ENST00000475298 MYLK4Q86YV6 388 aaPredicted RBP13.83□□□□□ -0.2
CCNL1-216ENST00000475298 XXYLT1Q8NBI6 393 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 TEPSINQ96N21 525 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 TRIM31Q9BZY9 425 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 PREBQ9HCU5 417 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
CCNL1-216ENST00000475298 TELO2Q9Y4R8 837 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
CCNL1-216ENST00000475298 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 HGSO14964 777 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 PMS2P54278 862 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 SLC29A2Q14542 456 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 TSNAXIP1Q2TAA8 658 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 EPC2Q52LR7 807 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 CBWD2Q8IUF1 395 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 ALG3Q92685 438 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 OPTNQ96CV9 577 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 FAM84AQ96KN4 292 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 NUDCD1Q96RS6 583 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 RMDN3Q96TC7 470 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 POP1Q99575 1024 aaKnown RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 DDX23Q9BUQ8 820 aaKnown RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 FZD1Q9UP38 647 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 RIPK3Q9Y572 518 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 TMEM110-MUSTN1A8MSY1 372 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 SORBS3O60504 671 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 SGPL1O95470 568 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 GSTA2P09210 222 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 VCAM1P19320 739 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 NIPA1Q7RTP0 329 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 CCNJLQ8IV13 435 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 EPS8L3Q8TE67 593 aaKnown RBP13.82□□□□□ -0.2
CCNL1-216ENST00000475298 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 LRMDAQ9H2I8 198 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 TMEM165Q9HC07 324 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 ATXN10Q9UBB4 475 aa13.82□□□□□ -0.2
CCNL1-216ENST00000475298 ANKRD62A6NC57 917 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 FTLP02792 175 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-216ENST00000475298 ADSSP30520 456 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 GSTT1P30711 240 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 ABCD1P33897 745 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 MARCKSL1P49006 195 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 GTF2BQ00403 316 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 SESTD1Q86VW0 696 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 TTC8Q8TAM2 541 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 PCDHB18PQ96TA0 734 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 PDCD2LQ9BRP1 358 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 SUDS3Q9H7L9 328 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-216ENST00000475298 TOPORSQ9NS56 1045 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-216ENST00000475298 NMRK1Q9NWW6 199 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 GALNT8Q9NY28 637 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 SCOCQ9UIL1 159 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 H0Y3Z8 333 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 PENKP01210 267 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-216ENST00000475298 MAGEA10P43363 369 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-216ENST00000475298 MXI1P50539 228 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 C6orf118Q5T5N4 469 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 PPM1KQ8N3J5 372 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 KRT35Q92764 455 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 PTPRN2Q92932 1015 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 TIPINQ9BVW5 301 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 KIAA1683Q9H0B3 1180 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
CCNL1-216ENST00000475298 PXMP2Q9NR77 195 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 CTTNBP2NLQ9P2B4 639 aa13.81□□□□□ -0.2
CCNL1-216ENST00000475298 INHBCP55103 352 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 SP4Q02446 784 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 MYBPC2Q14324 1141 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 ACBD5Q5T8D3 534 aaPredicted RBP13.8□□□□□ -0.2
CCNL1-216ENST00000475298 DUPD1Q68J44 220 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
CCNL1-216ENST00000475298 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 BSNDQ8WZ55 320 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 NCSTNQ92542 709 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 LPAR1Q92633 364 aa13.8□□□□□ -0.2
CCNL1-216ENST00000475298 ATG4CQ96DT6 458 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms