RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 STAT6P42226 847 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 PTPN5P54829 565 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 TCF15Q12870 199 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 HTR4Q13639 388 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 STK38Q15208 465 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 CTXN3Q4LDR2 81 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 JADE1Q6IE81 842 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 ZNF280DQ6N043 979 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 RTL10Q7L3V2 364 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 ZNF720Q7Z2F6 126 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 SLC44A3Q8N4M1 653 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 TMEM105Q8N8V8 129 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 LINC00301Q8NCQ3 95 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 ST13P5Q8NFI4 369 aaPredicted RBP9.81□□□□□ -0.84
USF1-204ENST00000472217 ITFG1Q8TB96 612 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 FGF13Q92913 245 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 NXPE3Q969Y0 559 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 HVCN1Q96D96 273 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 PRRX2Q99811 253 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 PANK2Q9BZ23 570 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 MFSD1Q9H3U5 465 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 RPF1Q9H9Y2 349 aaKnown RBP9.81□□□□□ -0.84
USF1-204ENST00000472217 DNMT3BQ9UBC3 853 aaKnown RBP9.81□□□□□ -0.84
USF1-204ENST00000472217 SEL1LQ9UBV2 794 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 FBXL5Q9UKA1 691 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 FBXL21Q9UKT6 434 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 CDH7Q9ULB5 785 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 PCDHB8Q9UN66 801 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
USF1-204ENST00000472217 STYXL1Q9Y6J8 313 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 ANK1P16157 1881 aa9.81□□□□□ -0.84
USF1-204ENST00000472217 TRIOO75962 3097 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 TSC2P49815 1807 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 ARHGEF37A1IGU5 675 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 M0QZQ0 153 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 PRRG1O14668 218 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 XPOTO43592 962 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 SEC24AO95486 1093 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 LRG1P02750 347 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 CFHP08603 1231 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 NFICP08651 508 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 ATF2P15336 505 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 NPR3P17342 541 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 GAP43P17677 238 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 AARSP49588 968 aaKnown RBP eCLIP9.8□□□□□ -0.84
USF1-204ENST00000472217 ACOT2P49753 483 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 KCNA1Q09470 495 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 PABPC1LQ4VXU2 614 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 SPATA1Q5VX52 437 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 TPGS2Q68CL5 300 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 CWF19L1Q69YN2 538 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 ADALQ6DHV7 355 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 ASTLQ6HA08 431 aaPredicted RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 SLFN12LQ6IEE8 588 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 PARM1Q6UWI2 310 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 CCDC73Q6ZRK6 1079 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 ALYREFQ86V81 257 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 CD302Q8IX05 232 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 TCEAL8Q8IYN2 117 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 SIX5Q8N196 739 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 PDILTQ8N807 584 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 APPL2Q8NEU8 664 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 FLCNQ8NFG4 579 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 BEST2Q8NFU1 509 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 ING5Q8WYH8 240 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 FGF14Q92915 247 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 TSPAN18Q96SJ8 248 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 STRA6Q9BX79 667 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 MRPL44Q9H9J2 332 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 CYP4F11Q9HBI6 524 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 OLFML3Q9NRN5 406 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 TBC1D7Q9P0N9 293 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 TFIP11Q9UBB9 837 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 AGO2Q9UKV8 859 aaKnown RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 ZFP37Q9Y6Q3 630 aaPredicted RBP9.8□□□□□ -0.84
USF1-204ENST00000472217 NUMBLQ9Y6R0 609 aa9.8□□□□□ -0.84
USF1-204ENST00000472217 NOTCH4Q99466 2003 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 FRMD3A2A2Y4 597 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 KRBA1A5PL33 1030 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 SPTLC2O15270 562 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 GALR2O43603 387 aaPredicted RBP9.79□□□□□ -0.84
USF1-204ENST00000472217 PPP6R2O75170 966 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 GCNT3O95395 438 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 RHOP08100 348 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 SRFP11831 508 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 IDEP14735 1019 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 CPB1P15086 417 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 ADSSP30520 456 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 ELF1P32519 619 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 MRE11P49959 708 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 CLCN5P51795 746 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 CASP5P51878 434 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 YWHAHQ04917 246 aaPredicted RBP9.79□□□□□ -0.84
USF1-204ENST00000472217 TMEM132DQ14C87 1099 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 SLC5A9Q2M3M2 681 aa9.79□□□□□ -0.84
USF1-204ENST00000472217 L1TD1Q5T7N2 865 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms