RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 ZNF214Q9UL59 606 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 ADAMTS5Q9UNA0 930 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 WASF3Q9UPY6 502 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 PCDHGA5Q9Y5G8 931 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 MRPL42Q9Y6G3 142 aaKnown RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 FRYQ5TBA9 3013 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SPTAN1Q13813 2472 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 FANCMQ8IYD8 2048 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 PATL2C9JE40 543 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 HRKO00198 91 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 GRM8O00222 908 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 RGS13O14921 159 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 NRDCO43847 1150 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SLC28A2O43868 658 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 TRIM13O60858 407 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 GLULP15104 373 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 PI3P19957 117 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 FGFR2P21802 821 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 GBP1P32455 592 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 TMPOP42166 694 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 RPS9P46781 194 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 OAZ1P54368 228 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SRSF3P84103 164 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 ICA1Q05084 483 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 FAM160A1Q05DH4 1040 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SMC1AQ14683 1233 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SEPT2Q15019 361 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SF3A2Q15428 464 aaKnown RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SLC14A2Q15849 920 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 TCTN1Q2MV58 587 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 LRRC24Q50LG9 513 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 COLEC12Q5KU26 742 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SNAP47Q5SQN1 464 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 NAA16Q6N069 864 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 CEP128Q6ZU80 1094 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 REC114Q7Z4M0 266 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 RELL1Q8IUW5 271 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF513Q8N8E2 541 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 DAGLBQ8NCG7 672 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 PANK1Q8TE04 598 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 GLG1Q92896 1179 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 CRELD1Q96HD1 420 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 MAP6Q96JE9 813 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SIGLEC10Q96LC7 697 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 MYADMQ96S97 322 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 FOXP3Q9BZS1 431 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 ARRDC1-AS1Q9H2J1 176 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SFXN1Q9H9B4 322 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 CRTAC1Q9NQ79 661 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SLC2A4RGQ9NR83 387 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 SIRT5Q9NXA8 310 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 MBD1Q9UIS9 605 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-213ENST00000471667 LZTS1Q9Y250 596 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 FRYLO94915 3013 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 PIEZO2Q9H5I5 2752 aa4.3□□□□□ -1.72
LRCH3-213ENST00000471667 DSPP15924 2871 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PTPRSQ13332 1948 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 DLG5Q8TDM6 1919 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 LOC102724159A0A0B4J2E5 919 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM82A0PJX8 343 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 C4orf47A7E2U8 309 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 ATP2A1O14983 1001 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 DGKIO75912 1065 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 FGF18O76093 207 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 UBOX5O94941 541 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TOP3BO95985 862 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PPM1AP35813 382 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 KIR2DL1P43626 348 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 KIR2DL2P43627 348 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 EPHB3P54753 998 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PCBP3P57721 371 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 GNAI1P63096 354 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 RNF4P78317 190 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 KCNC3Q14003 757 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 GIT2Q14161 759 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 MPP2Q14168 576 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PWP2Q15269 919 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 MLF2Q15773 248 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 DGKDQ16760 1214 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 LETM2Q2VYF4 491 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 KRTAP21-3Q3LHN1 58 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PAN2Q504Q3 1202 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TAPT1Q6NXT6 567 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 RASGRP2Q7LDG7 609 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PPFIBP1Q86W92 1011 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 LONP2Q86WA8 852 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 SLC44A3Q8N4M1 653 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF655Q8N720 491 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PRPF38AQ8NAV1 312 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 GOLM1Q8NBJ4 401 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 FBXO27Q8NI29 283 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 SCFD2Q8WU76 684 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 NSUN4Q96CB9 384 aaKnown RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF689Q96CS4 500 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TCTN2Q96GX1 697 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms