RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SNF8Q96H20 258 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 MAK16Q9BXY0 300 aaKnown RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 PCIF1Q9H4Z3 704 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 RIOX1Q9H6W3 641 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 JMJD4Q9H9V9 463 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 KLHL11Q9NVR0 708 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 TAS2R1Q9NYW7 299 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 SHANK3Q9BYB0 1731 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 FRMPD4Q14CM0 1322 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 DCTN3O75935 186 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 ATF2P15336 505 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 ATP5DP30049 168 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 GRIA2P42262 883 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 PABPC1LQ4VXU2 614 aaKnown RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 MFSD14BQ5SR56 506 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 ANKS1BQ7Z6G8 1248 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 NOP9Q86U38 636 aaKnown RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 SLC47A2Q86VL8 602 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 ADGRF4Q8IZF3 695 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 PDCD7Q8N8D1 485 aaKnown RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 AZIN2Q96A70 460 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 MCUR1Q96AQ8 359 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 OPTNQ96CV9 577 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 NMD3Q96D46 503 aaKnown RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 FAM163AQ96GL9 167 aaPredicted RBP8.43□□□□□ -1.06
TPM3-215ENST00000469717 TIPINQ9BVW5 301 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 SPATA16Q9BXB7 569 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 NUB1Q9Y5A7 615 aa8.43□□□□□ -1.06
TPM3-215ENST00000469717 MIF4GDA9UHW6 222 aaKnown RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 GOLGA8SH3BPF8 625 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 GOLGA8MH3BSY2 632 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 ECE2O60344 883 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 BAG2O95816 211 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 PSMC4P43686 418 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 GPC5P78333 572 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 OCRLQ01968 901 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 VPS52Q8N1B4 723 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 ZNF75CPQ92670 426 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 TRAPPC9Q96Q05 1148 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 PHF12Q96QT6 1004 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 RBM15Q96T37 977 aaKnown RBP eCLIP8.42□□□□□ -1.06
TPM3-215ENST00000469717 ZNF184Q99676 751 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 SAYSD1Q9NPB0 183 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 CHCHD3Q9NX63 227 aaKnown RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 MAST2Q6P0Q8 1798 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 COL22A1Q8NFW1 1626 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 MAGEA13PA6NCF6 341 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 CYP26A1O43174 497 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 GCLMP48507 274 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 BPIFB4P59827 614 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 NOP14P78316 857 aaKnown RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 MYL7Q01449 175 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 GAD2Q05329 585 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 SPARCL1Q14515 664 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 CMPK2Q5EBM0 449 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 CFAP157Q5JU67 520 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 PCNX4Q63HM2 1172 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 C11orf63Q6NUN7 778 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 RHOT2Q8IXI1 618 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 RIBC1Q8N443 379 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 ZNF653Q96CK0 615 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 GRAMD1AQ96CP6 724 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 WHRNQ9P202 907 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 SLC17A7Q9P2U7 560 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 LGALS13Q9UHV8 139 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 MROH7Q68CQ1 1323 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 ZSCAN9O15535 394 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 CREB3O43889 395 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 ATP5HO75947 161 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 NR1H3Q13133 447 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 PDK4Q16654 411 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 SHROOM1Q2M3G4 852 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 HYIQ5T013 277 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 IZUMO3Q5VZ72 239 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 ANKRD35Q8N283 1001 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 MYCT1Q8N699 235 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 FBXO41Q8TF61 875 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 PSPC1Q8WXF1 523 aaKnown RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 BICD1Q96G01 975 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 LZTS2Q9BRK4 669 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 BTBD10Q9BSF8 475 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 LRRC19Q9H756 370 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 DMAP1Q9NPF5 467 aaPredicted RBP8.42□□□□□ -1.06
TPM3-215ENST00000469717 LRRC4BQ9NT99 713 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 CLIC5Q9NZA1 410 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 NARFQ9UHQ1 456 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 KDM3AQ9Y4C1 1321 aa8.42□□□□□ -1.06
TPM3-215ENST00000469717 TAF1LQ8IZX4 1826 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 ESYT2A0FGR8 921 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 MAP3K7O43318 606 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 CHMP2AO43633 222 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 KRT4P19013 534 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 CETN2P41208 172 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 MAGEA4P43358 317 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 SPIRE1Q08AE8 756 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms