RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 GSTA5Q7RTV2 222 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 MGARPQ8TDB4 240 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 MAGOHBQ96A72 148 aaKnown RBP13.09□□□□□ -0.31
USP11-206ENST00000469080 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
USP11-206ENST00000469080 STIM2Q9P246 746 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 AKT3Q9Y243 479 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 TMEM98Q9Y2Y6 226 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 NOC2LQ9Y3T9 749 aaKnown RBP13.09□□□□□ -0.31
USP11-206ENST00000469080 RREB1Q92766 1687 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 A8MUI8 341 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 PDE6CP51160 858 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 INHBCP55103 352 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 AMPD2Q01433 879 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
USP11-206ENST00000469080 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 GANQ9H2C0 597 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 THAP12O43422 761 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 PTGER2P43116 358 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 TRPC3Q13507 836 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 KCTD2Q14681 263 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 IFT20Q8IY31 132 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 RIT2Q99578 217 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 IMPG2Q9BZV3 1241 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 GGT7Q9UJ14 662 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 EXOC7Q9UPT5 735 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 ARAP2Q8WZ64 1704 aa13.09□□□□□ -0.31
USP11-206ENST00000469080 F8VZ95 297 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.31
USP11-206ENST00000469080 HNRNPRO43390 633 aaKnown RBP13.08□□□□□ -0.31
USP11-206ENST00000469080 NPTXRO95502 500 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 NOVP48745 357 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 KRT76Q01546 638 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 PPP2R5CQ13362 524 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 IRF2BP2Q7Z5L9 587 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 KIF2BQ8N4N8 673 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 ARFGAP2Q8N6H7 521 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 TEPSINQ96N21 525 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 TMEM206Q9H813 350 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 ASIC3Q9UHC3 531 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 ANAPC7Q9UJX3 599 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 TBX20Q9UMR3 447 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 TRAF3IP3Q9Y228 551 aa13.08□□□□□ -0.31
USP11-206ENST00000469080 CTNNA2P26232 953 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 KCNJ2P63252 427 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 LACTBP83111 547 aaPredicted RBP13.08□□□□□ -0.32
USP11-206ENST00000469080 ATP11AP98196 1134 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.32
USP11-206ENST00000469080 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.32
USP11-206ENST00000469080 GBP5Q96PP8 586 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 TMEM117Q9H0C3 514 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
USP11-206ENST00000469080 A0A1W2PQJ5 194 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 CLCN2P51788 898 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 SP2Q02086 613 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 PPATQ06203 517 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 NAB2Q15742 525 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.08□□□□□ -0.32
USP11-206ENST00000469080 SEMA4DQ92854 862 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
USP11-206ENST00000469080 NR2E1Q9Y466 385 aa13.08□□□□□ -0.32
USP11-206ENST00000469080 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 NDUFB5O43674 189 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 TMCC1O94876 653 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CTNNA1P35221 906 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 SERPINB4P48594 390 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 STAT5BP51692 787 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 NLRP11P59045 1033 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 KLC1Q07866 573 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 SV2AQ7L0J3 742 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 ARHGAP18Q8N392 663 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 ANKS4BQ8N8V4 417 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 ATG4AQ8WYN0 398 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 KRT35Q92764 455 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 AGPAT1Q99943 283 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CENPOQ9BU64 300 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 VCX3BQ9H321 246 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 VCX3AQ9NNX9 186 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CNOT8Q9UFF9 292 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 AGO2Q9UKV8 859 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 SYNJ2BP-COX16A0A087WUM0 186 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CCT8L1PA6NM43 557 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 TCF7P36402 384 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 PSMC4P43686 418 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms