RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 STAT5BP51692 787 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 ZNF131P52739 623 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 RTP1P59025 263 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 PSMC6P62333 389 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 CYP27A1Q02318 531 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 MAP2K1Q02750 393 aaPredicted RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 RPL6Q02878 288 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 LMNB2Q03252 620 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 GIT2Q14161 759 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 CTTNQ14247 550 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 ZRSR1Q15695 479 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 TSNAXIP1Q2TAA8 658 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 ARSHQ5FYA8 562 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 FAM160B1Q5W0V3 765 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 CDH24Q86UP0 819 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 TPH2Q8IWU9 490 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 DHX37Q8IY37 1157 aaKnown RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 SLC17A8Q8NDX2 589 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 TMEM174Q8WUU8 243 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 DHTKD1Q96HY7 919 aaPredicted RBP6.06□□□□□ -1.44
VPS41-211ENST00000466017 FAM167AQ96KS9 214 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 GPR20Q99678 358 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 APBA2Q99767 749 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 LXNQ9BS40 222 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 FOXQ1Q9C009 403 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 ST6GALNAC4Q9H4F1 302 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 MLXIPQ9HAP2 919 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 GRPEL1Q9HAV7 217 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 COL4A3BPQ9Y5P4 624 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 PLXNA1Q9UIW2 1896 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 PLXNB2O15031 1838 aa6.06□□□□□ -1.44
VPS41-211ENST00000466017 EMSYQ7Z589 1322 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 IGSF9BQ9UPX0 1349 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 LRRC10BA6NIK2 292 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 HBP1O60381 514 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 KPNA6O60684 536 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 LRIG2O94898 1065 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ARIH2O95376 493 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PGRP06401 933 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 GAP43P17677 238 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 CTGFP29279 349 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 YWHABP31946 246 aaKnown RBP6.05□□□□□ -1.44
VPS41-211ENST00000466017 ABCD1P33897 745 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ASIC1P78348 528 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 CYP4A11Q02928 519 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ARHGAP1Q07960 439 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 NCAPHQ15003 741 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 CPSF6Q16630 551 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS41-211ENST00000466017 LY6KQ17RY6 165 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ANO6Q4KMQ2 910 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 CENPPQ6IPU0 288 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 SWSAP1Q6NVH7 229 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 CCDC60Q8IWA6 550 aaPredicted RBP6.05□□□□□ -1.44
VPS41-211ENST00000466017 ADSSL1Q8N142 457 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 GUF1Q8N442 669 aaKnown RBP6.05□□□□□ -1.44
VPS41-211ENST00000466017 GOLM1Q8NBJ4 401 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PPTC7Q8NI37 304 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PPP1R13LQ8WUF5 828 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 GATAD2BQ8WXI9 593 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ERO1AQ96HE7 468 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 CEP89Q96ST8 783 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PCYT2Q99447 389 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PLIN2Q99541 437 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 MIPEPQ99797 713 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 STRA6Q9BX79 667 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 BLZF1Q9H2G9 400 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 BHMT2Q9H2M3 363 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 SMARCAD1Q9H4L7 1026 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 BCAS3Q9H6U6 928 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ZNF302Q9NR11 478 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 OLFML3Q9NRN5 406 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PANK4Q9NVE7 773 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 WRAP73Q9P2S5 460 aaPredicted RBP6.05□□□□□ -1.44
VPS41-211ENST00000466017 GABBR1Q9UBS5 961 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 SRRDQ9UH36 339 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ADAMTS1Q9UHI8 967 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 ADAMTS6Q9UKP5 1117 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 FAM184BQ9ULE4 1060 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 PCDHA2Q9Y5H9 948 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 MGAMO43451 1857 aa6.05□□□□□ -1.44
VPS41-211ENST00000466017 THSD7BQ9C0I4 1608 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 WDR81Q562E7 1941 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 IGKV6-21A0A0C4DH24 114 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ARHGEF35A5YM69 484 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CHURC1-FNTBB4DL54 471 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 DDX39AO00148 427 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 EIF3DO15371 548 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS41-211ENST00000466017 ASAP2O43150 1006 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CHMP2AO43633 222 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 FKTNO75072 461 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 DUSP11O75319 330 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 TBC1D8O95759 1140 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CST3P01034 146 aaPredicted RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 HSPA6P17066 643 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CYP2B6P20813 491 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CCNE1P24864 410 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 TCF7P36402 384 aaPredicted RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 ADCYAP1R1P41586 468 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 PRCPP42785 496 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms