RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CASP10Q92851 521 aa19.18■□□□□ 0.66
CCDC188-201ENST00000439765 MRPL17Q9NRX2 175 aaKnown RBP19.18■□□□□ 0.66
CCDC188-201ENST00000439765 PCDHA5Q9Y5H7 936 aa19.18■□□□□ 0.66
CCDC188-201ENST00000439765 SCN1AP35498 2009 aa19.18■□□□□ 0.66
CCDC188-201ENST00000439765 PIEZO1Q92508 2521 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 TMEM189-UBE2V1I3L0A0 370 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 I3L4J1 428 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 TGFB1I1O43294 461 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 SMC2O95347 1197 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 WNT7BP56706 349 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 FAM171A1Q5VUB5 890 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 SMARCE1Q969G3 411 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 CCDC47Q96A33 483 aaKnown RBP19.17■□□□□ 0.66
CCDC188-201ENST00000439765 AGPAT3Q9NRZ7 376 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 RBAKQ9NYW8 714 aaPredicted RBP19.17■□□□□ 0.66
CCDC188-201ENST00000439765 MUTYHQ9UIF7 546 aa19.17■□□□□ 0.66
CCDC188-201ENST00000439765 UBQLN1Q9UMX0 589 aaKnown RBP19.17■□□□□ 0.66
CCDC188-201ENST00000439765 EXTL3O43909 919 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CLASP2O75122 1294 aaKnown RBP19.16■□□□□ 0.66
CCDC188-201ENST00000439765 ADRB2P07550 413 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 BRCC3P46736 316 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CYP2J2P51589 502 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 DSG1Q02413 1049 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 PSMD2Q13200 908 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 TMEM132DQ14C87 1099 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 KNOP1Q1ED39 458 aaKnown RBP19.16■□□□□ 0.66
CCDC188-201ENST00000439765 USP41Q3LFD5 358 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 RTP2Q5QGT7 225 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 DCLRE1AQ6PJP8 1040 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 HS2ST1Q7LGA3 356 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CEP57Q86XR8 500 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 BRSK2Q8IWQ3 736 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 GPD1LQ8N335 351 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 DDX27Q96GQ7 796 aaKnown RBP19.16■□□□□ 0.66
CCDC188-201ENST00000439765 HSPBP1Q9NZL4 362 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CLIC2O15247 247 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 RHOBTB3O94955 611 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CNPP09543 421 aaKnown RBP19.16■□□□□ 0.66
CCDC188-201ENST00000439765 PLA2G5P39877 138 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 ZBTB6Q15916 424 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 PRSS55Q6UWB4 352 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CD300LGQ6UXG3 332 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CD302Q8IX05 232 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 EFCAB13Q8IY85 973 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 RIN2Q8WYP3 895 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-201ENST00000439765 GSDMAQ96QA5 445 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 ASB7Q9H672 318 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 CHST7Q9NS84 486 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 NUB1Q9Y5A7 615 aa19.16■□□□□ 0.66
CCDC188-201ENST00000439765 XPOTO43592 962 aaKnown RBP19.15■□□□□ 0.66
CCDC188-201ENST00000439765 IL18RAPO95256 599 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 LDHAP00338 332 aaKnown RBP19.15■□□□□ 0.66
CCDC188-201ENST00000439765 RPL9P32969 192 aaKnown RBP19.15■□□□□ 0.66
CCDC188-201ENST00000439765 ELAVL2Q12926 359 aaKnown RBP19.15■□□□□ 0.66
CCDC188-201ENST00000439765 KIAA0319Q5VV43 1072 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 CBWD2Q8IUF1 395 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 GLYCTKQ8IVS8 523 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 TTPALQ9BTX7 342 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 EMILIN2Q9BXX0 1053 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 MAPK8IP1Q9UQF2 711 aa19.15■□□□□ 0.66
CCDC188-201ENST00000439765 KMT2EQ8IZD2 1858 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 KIAA0391O15091 583 aaKnown RBP19.14■□□□□ 0.65
CCDC188-201ENST00000439765 LILRB3O75022 631 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 RPL17P18621 184 aaKnown RBP19.14■□□□□ 0.65
CCDC188-201ENST00000439765 TKTP29401 623 aaKnown RBP19.14■□□□□ 0.65
CCDC188-201ENST00000439765 ITIH3Q06033 890 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 KCNB1Q14721 858 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 SPATA1Q5VX52 437 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 SMYD4Q8IYR2 804 aaPredicted RBP19.14■□□□□ 0.65
CCDC188-201ENST00000439765 BEST2Q8NFU1 509 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 FAM84AQ96KN4 292 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 KLHL5Q96PQ7 755 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 GZF1Q9H116 711 aaPredicted RBP19.14■□□□□ 0.65
CCDC188-201ENST00000439765 SSX2IPQ9Y2D8 614 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 DERAQ9Y315 318 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 C2CD2Q9Y426 696 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 DOCK8Q8NF50 2099 aa19.14■□□□□ 0.65
CCDC188-201ENST00000439765 SYCE3A1L190 88 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 PPEF2O14830 753 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 TEX28O15482 410 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 TRAPPC3O43617 180 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 CYP3A5P20815 502 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 KLRC2P26717 231 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 LRPAP1P30533 357 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.13■□□□□ 0.65
CCDC188-201ENST00000439765 EDAQ92838 391 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 RPGRIP1Q96KN7 1286 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 NECTIN4Q96NY8 510 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 TSPAN18Q96SJ8 248 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 ADAM7Q9H2U9 754 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 PDE11AQ9HCR9 933 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 RMND1Q9NWS8 449 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 MAN1B1Q9UKM7 699 aa19.13■□□□□ 0.65
CCDC188-201ENST00000439765 ADH1AP07327 375 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 EPCAMP16422 314 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 TFAMQ00059 246 aaKnown RBP19.12■□□□□ 0.65
CCDC188-201ENST00000439765 POU5F1Q01860 360 aaKnown RBP19.12■□□□□ 0.65
CCDC188-201ENST00000439765 PSMD5Q16401 504 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 SNRNP35Q16560 246 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms