RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 USP38Q8NB14 1042 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 ACTRT1Q8TDG2 376 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 CYP2C8P10632 490 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 COPS2P61201 443 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 CYP24A1Q07973 514 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 TERF2Q15554 542 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 TRIP13Q15645 432 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 CACYBPQ9HB71 228 aaKnown RBP12.18□□□□□ -0.46
PTCH1-208ENST00000430669 MRGBPQ9NV56 204 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 KBTBD13C9JR72 458 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 MX2P20592 715 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 ARSEP51690 589 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 FBXO41Q8TF61 875 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 MCEEQ96PE7 176 aa12.18□□□□□ -0.46
PTCH1-208ENST00000430669 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 CYP3A43Q9HB55 503 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 APOEP02649 317 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 ARP10275 920 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 DSEQ9UL01 958 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 PACSIN2Q9UNF0 486 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 TACC3Q9Y6A5 838 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 COPEO14579 308 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 TOM1L1O75674 476 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 TATDN1Q6P1N9 297 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 KIRREL3Q8IZU9 778 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 FEZF2Q8TBJ5 459 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 ITGA11Q9UKX5 1188 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 SMG5Q9UPR3 1016 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 COL16A1Q07092 1604 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 BYSLQ13895 437 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 SNX17Q15036 470 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 CGRRF1Q99675 332 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 SNX24Q9Y343 169 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 FAM86B1E9PN63 330 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 FAM86B2P0C5J1 330 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 MTMR14Q8NCE2 650 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 NUF2Q9BZD4 464 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 ISCUQ9H1K1 167 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 LMNAP02545 664 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 EIF3EP60228 445 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 EFHC1Q5JVL4 640 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 PAPD7Q5XG87 772 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 REXO1L1PQ8IX06 675 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 CPA5Q8WXQ8 436 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 AP1B1Q10567 949 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 TBX2Q13207 712 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 ANO4Q32M45 955 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 HYIQ5T013 277 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 DDX47Q9H0S4 455 aaKnown RBP12.17□□□□□ -0.46
PTCH1-208ENST00000430669 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
PTCH1-208ENST00000430669 DRP2Q13474 957 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 MMEL1Q495T6 779 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 PLEKHH3Q7Z736 793 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ARHGAP18Q8N392 663 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ROPN1BQ9BZX4 212 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ROPN1Q9HAT0 212 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 MYO18AQ92614 2054 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 KPNA7A9QM74 516 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 AGTP01019 485 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 XPAP23025 273 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 MTA1Q13330 715 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 RNF180Q86T96 592 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 GMNCA6NCL1 334 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 NFIBO00712 420 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 TFDP3Q5H9I0 405 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 MS4A14Q96JA4 679 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 SERPINI1Q99574 410 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 FAM198AQ9UFP1 575 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 STK38LQ9Y2H1 464 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 HSPA9P38646 679 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 IFNAR2P48551 515 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 MAGOHP61326 146 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 DDX23Q9BUQ8 820 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ODC1P11926 461 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 MUM1Q2TAK8 710 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 UHMK1Q8TAS1 419 aaKnown RBP12.16□□□□□ -0.46
PTCH1-208ENST00000430669 ATP8B4Q8TF62 1192 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 HEMGNQ9BXL5 484 aa12.16□□□□□ -0.46
PTCH1-208ENST00000430669 DPP3Q9NY33 737 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms