RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CASKIN2Q8WXE0 1202 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 FUBP3Q96I24 572 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 CRAMP1Q96RY5 1269 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 MYOCQ99972 504 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 SLC5A4Q9NY91 659 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 TROQ12816 1431 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 EEA1Q15075 1411 aa6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 ZNF142P52746 1687 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P5-201ENST00000428894 CDC42BPBQ9Y5S2 1711 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 CEP170BQ9Y4F5 1589 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 PIPSLA2A3N6 862 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 MARCH11A6NNE9 402 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 SPDEFO95238 335 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 NUDT3O95989 172 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 ELANEP08246 267 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 PCSK1P29120 753 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 AVPR1BP47901 424 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 CLUL1Q15846 466 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 ZNF529Q6P280 563 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 MAPKAPK5Q8IW41 473 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 TMEM132CQ8N3T6 1108 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 CNTD1Q8N815 330 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 PPM1NQ8N819 430 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 OR2I1PQ8NGU4 316 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 CAVIN3Q969G5 261 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 CYFIP2Q96F07 1278 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 SPC25Q9HBM1 224 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 SYBUQ9NX95 663 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 RNF181Q9P0P0 153 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 KIDINS220Q9ULH0 1771 aa6.54□□□□□ -1.36
HMGB3P5-201ENST00000428894 TEX33O43247 280 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 CDKL5O76039 1030 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 HKR1P10072 659 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 SLC6A2P23975 617 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 ADRA1BP35368 520 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 SPDYE7PQ495Y7 208 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 ABHD17BQ5VST6 288 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 ARMC6Q6NXE6 501 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 GGT6Q6P531 493 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 SEM1Q6ZVN7 128 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 UBE3BQ7Z3V4 1068 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 NRG4Q8WWG1 115 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 ASB10Q8WXI3 467 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 DPF2Q92785 391 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 ZSWIM1Q9BR11 485 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 PUS7LQ9H0K6 701 aaKnown RBP6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 MANSC1Q9H8J5 431 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 FBXO34Q9NWN3 711 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 FAM30AQ9NZY2 134 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 SLC23A1Q9UHI7 598 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 RUVBL1Q9Y265 456 aaKnown RBP6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 NOX1Q9Y5S8 564 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 SHANK2Q9UPX8 1470 aa6.53□□□□□ -1.36
HMGB3P5-201ENST00000428894 SPAG9O60271 1321 aaKnown RBP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 MYO3AQ8NEV4 1616 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 A0A1B0GTW7 788 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 TRIM75PA6NK02 468 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 GPR32O75388 356 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 FOSP01100 380 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 AMY1AP04745 511 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 B3GNTL1Q67FW5 361 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 PGM2L1Q6PCE3 622 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 OLFML1Q6UWY5 402 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 ZGPATQ8N5A5 531 aaKnown RBP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 COQ10AQ96MF6 247 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 C7orf25Q9BPX7 421 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 RNPEPQ9H4A4 650 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 INTUQ9ULD6 942 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 EPN1Q9Y6I3 576 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 A2ML1A8K2U0 1454 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 CLTCQ00610 1675 aaKnown RBP6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 ITSN2Q9NZM3 1697 aa6.52□□□□□ -1.37
HMGB3P5-201ENST00000428894 ABCC1P33527 1531 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 PRSS23O95084 383 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 FGFR4P22455 802 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 TGM1P22735 817 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 GCSHP23434 173 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 OCA2Q04671 838 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 ZNF575Q86XF7 245 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 RNF31Q96EP0 1072 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 RIOX1Q9H6W3 641 aa6.51□□□□□ -1.37
HMGB3P5-201ENST00000428894 MYBBP1AQ9BQG0 1328 aaKnown RBP6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 DNMT1P26358 1616 aaKnown RBP6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 POLR1AO95602 1720 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 AATKQ6ZMQ8 1374 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 ITGAMP11215 1152 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 CKBP12277 381 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 DDCP20711 480 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 SEC24CP53992 1094 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 BLOC1S1P78537 153 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 FOXI1Q12951 378 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 MTM1Q13496 603 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 INAVAQ3KP66 663 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms