RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PPP2R3AQ06190 1150 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 CUL4BQ13620 913 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 SPATA1Q5VX52 437 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 C15orf39Q6ZRI6 1047 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 KCNG4Q8TDN1 519 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 ACCSQ96QU6 501 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 C7orf25Q9BPX7 421 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 WDR6Q9NNW5 1121 aaKnown RBP13.85□□□□□ -0.19
GPC1-204ENST00000426280 SEL1LQ9UBV2 794 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 FBXL5Q9UKA1 691 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 UBQLN1Q9UMX0 589 aaKnown RBP13.85□□□□□ -0.19
GPC1-204ENST00000426280 BACE2Q9Y5Z0 518 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 CITO14578 2027 aa13.85□□□□□ -0.19
GPC1-204ENST00000426280 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 A0A1B0GVL5 298 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 PIRO00625 290 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 ABLIM3O94929 683 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 C8AP07357 584 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 CYP3A5P20815 502 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 MCM4P33991 863 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 AFMP43652 599 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 AARSP49588 968 aaKnown RBP eCLIP13.84□□□□□ -0.19
GPC1-204ENST00000426280 EHHADHQ08426 723 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 TRIM67Q6ZTA4 783 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 EPM2AIP1Q7L775 607 aaPredicted RBP13.84□□□□□ -0.19
GPC1-204ENST00000426280 GRASPQ7Z6J2 395 aaPredicted RBP13.84□□□□□ -0.19
GPC1-204ENST00000426280 ZDHHC14Q8IZN3 488 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 IQUBQ8NA54 791 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 POMGNT1Q8WZA1 660 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 HVCN1Q96D96 273 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 ASIC4Q96FT7 647 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 BORCS6Q96GS4 357 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 TMEM209Q96SK2 561 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 FAM213AQ9BRX8 229 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 DNMT3BQ9UBC3 853 aaKnown RBP13.84□□□□□ -0.19
GPC1-204ENST00000426280 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 DOCK6Q96HP0 2047 aa13.84□□□□□ -0.19
GPC1-204ENST00000426280 MTCL1Q9Y4B5 1905 aaKnown RBP13.84□□□□□ -0.19
GPC1-204ENST00000426280 ANK1P16157 1881 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 PRR33A8MZF0 331 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 M0QZQ0 153 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 SYN3O14994 580 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 TGFB1I1O43294 461 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.2
GPC1-204ENST00000426280 KLRC4O43908 158 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 C1RP00736 705 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 SCP2P22307 547 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 ASIC1P78348 528 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 C9orf57Q5W0N0 161 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 SLFN12LQ6IEE8 588 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 SLC8B1Q6J4K2 584 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 ANKS3Q6ZW76 656 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 SLC7A14Q8TBB6 771 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 RPP25Q9BUL9 199 aaKnown RBP13.83□□□□□ -0.2
GPC1-204ENST00000426280 CRISPLD1Q9H336 500 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 KCNH3Q9ULD8 1083 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 PCDHB13Q9Y5F0 798 aa13.83□□□□□ -0.2
GPC1-204ENST00000426280 TMEM221A6NGB7 291 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 M0R296 226 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 NARSO43776 548 aaKnown RBP13.82□□□□□ -0.2
GPC1-204ENST00000426280 PFKFB1P16118 471 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 LILRA4P59901 499 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 CREMQ03060 361 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 TMEM132DQ14C87 1099 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 PPM1LQ5SGD2 360 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 RNF19BQ6ZMZ0 732 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 CCDC149Q6ZUS6 474 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 CCDC65Q8IXS2 484 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 TDRD5Q8NAT2 981 aaKnown RBP13.82□□□□□ -0.2
GPC1-204ENST00000426280 ZNF461Q8TAF7 563 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 ITFG1Q8TB96 612 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 SCFD1Q8WVM8 642 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 PAGE5Q96GU1 130 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 SENP8Q96LD8 212 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
GPC1-204ENST00000426280 CUEDC2Q9H467 287 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 GOLPH3LQ9H4A5 285 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 ASB7Q9H672 318 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 PIDD1Q9HB75 910 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 HPSEQ9Y251 543 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 USTQ9Y2C2 406 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 CLUHO75153 1309 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 PTPRJQ12913 1337 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 TECTAO75443 2155 aa13.82□□□□□ -0.2
GPC1-204ENST00000426280 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms