RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 TM4SF1P30408 202 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 PTK6Q13882 451 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 EFTUD2Q15029 972 aaKnown RBP eCLIP17.63■□□□□ 0.415e-10■■■■□ 20.9
PKP4-204ENST00000421462 LRRC36Q1X8D7 754 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 OR52E8Q6IFG1 317 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 LRRC74BQ6ZQY2 392 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 PI4K2AQ9BTU6 479 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 WRAP73Q9P2S5 460 aaPredicted RBP17.63■□□□□ 0.41
PKP4-204ENST00000421462 NEU2Q9Y3R4 380 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 GNPATO15228 680 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 NEK3P51956 506 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 TTC7BQ86TV6 843 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 LRRC6Q86X45 466 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 PASD1Q8IV76 773 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 GRK7Q8WTQ7 553 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 ACSF2Q96CM8 615 aaPredicted RBP17.63■□□□□ 0.41
PKP4-204ENST00000421462 MAK16Q9BXY0 300 aaKnown RBP17.63■□□□□ 0.41
PKP4-204ENST00000421462 TOPORSQ9NS56 1045 aaPredicted RBP17.63■□□□□ 0.41
PKP4-204ENST00000421462 PCMTD2Q9NV79 361 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 VAV3Q9UKW4 847 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 LRCH1Q9Y2L9 728 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 RNF8O76064 485 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 HAUS5O94927 633 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 CYP11B1P15538 503 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 SERPINB3P29508 390 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 USP4Q13107 963 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 ENDOVQ8N8Q3 282 aaKnown RBP17.63■□□□□ 0.41
PKP4-204ENST00000421462 TTC1Q99614 292 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 MKNK1Q9BUB5 465 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 ASB3Q9Y575 518 aa17.63■□□□□ 0.41
PKP4-204ENST00000421462 KIF13BQ9NQT8 1826 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 EIF3DO15371 548 aaKnown RBP eCLIP17.62■□□□□ 0.41
PKP4-204ENST00000421462 NT5C2P49902 561 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 LBRQ14739 615 aaKnown RBP17.62■□□□□ 0.41
PKP4-204ENST00000421462 PDK4Q16654 411 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 ATP13A4Q4VNC1 1196 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 IRGCQ6NXR0 463 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 STXBP4Q6ZWJ1 553 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 FAM161BQ96MY7 647 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 LGALS13Q9UHV8 139 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 NOCTQ9UK39 431 aaKnown RBP17.62■□□□□ 0.41
PKP4-204ENST00000421462 SPATA31A1Q5TZJ5 1347 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 E7ENQ6 273 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 PSMC4P43686 418 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 HADHBP55084 474 aaKnown RBP17.62■□□□□ 0.41
PKP4-204ENST00000421462 ISLR2Q6UXK2 745 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
PKP4-204ENST00000421462 EZH1Q92800 747 aaPredicted RBP17.62■□□□□ 0.41
PKP4-204ENST00000421462 CFAP57Q96MR6 1250 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 C10orf88Q9H8K7 445 aa17.62■□□□□ 0.41
PKP4-204ENST00000421462 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■■■ 32.6
PKP4-204ENST00000421462 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.62■□□□□ 0.41
PKP4-204ENST00000421462 SMCHD1A6NHR9 2005 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 CYP3A7-CYP3A51PA0A087WV96 503 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 ARHGEF35A5YM69 484 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 TROVE2P10155 538 aaKnown RBP eCLIP17.61■□□□□ 0.41
PKP4-204ENST00000421462 CYP3A7P24462 503 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 SHMT1P34896 483 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 GCLCP48506 637 aaPredicted RBP17.61■□□□□ 0.41
PKP4-204ENST00000421462 GPS1Q13098 491 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 CUL3Q13618 768 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 SYCP2LQ5T4T6 812 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 CCDC89Q8N998 374 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 PLEKHO2Q8TD55 490 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 SEMA4DQ92854 862 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 ANKRD27Q96NW4 1050 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 GTF3C4Q9UKN8 822 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 MAP3K7O43318 606 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 GAS7O60861 476 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 ESRRAP11474 423 aaPredicted RBP17.61■□□□□ 0.41
PKP4-204ENST00000421462 GCAP28676 217 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 RINLQ6ZS11 566 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 PTF1AQ7RTS3 328 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 SLC25A41Q8N5S1 370 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 GORASP1Q9BQQ3 440 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 AMNQ9BXJ7 453 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 GSC2O15499 205 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 CCDC22O60826 627 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 AMPD1P23109 780 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 ZFPM1Q8IX07 1006 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 KBTBD2Q8IY47 623 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 FAM136AQ96C01 138 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 FAM20AQ96MK3 541 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 FIZ1Q96SL8 496 aa17.61■□□□□ 0.41
PKP4-204ENST00000421462 TMEM150BA6NC51 233 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 GDF11O95390 407 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 PSMG1O95456 288 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 PDIA2Q13087 525 aaKnown RBP17.6■□□□□ 0.41
PKP4-204ENST00000421462 CLPTM1LQ96KA5 538 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 BTBD10Q9BSF8 475 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 DMAC2Q9NW81 257 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 SLC17A7Q9P2U7 560 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 SORBS3O60504 671 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 CYP1A2P05177 515 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 GSTT1P30711 240 aa17.6■□□□□ 0.41
PKP4-204ENST00000421462 SSTR1P30872 391 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms