RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PTGS2P35354 604 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 HK3P52790 923 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 RESTQ13127 1097 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 TP53BP2Q13625 1128 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 IFIT1BQ5T764 474 aaKnown RBP5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 ZNF365Q70YC5 407 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 HEATR3Q7Z4Q2 680 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 FAM90A1Q86YD7 464 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 GRAMD1CQ8IYS0 662 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 TMEM132CQ8N3T6 1108 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 Q8NA96 180 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 C3orf20Q8ND61 904 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 PLBD2Q8NHP8 589 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 PROKR1Q8TCW9 393 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 NEU4Q8WWR8 484 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 MRPS18AQ9NVS2 196 aaKnown RBP5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 JKAMPQ9P055 326 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 KLHL42Q9P2K6 505 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 PNMA8BQ9ULN7 279 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 E9PLN8 166 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 AP1G1O43747 822 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 DTNBO60941 627 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 RFPL1O75677 317 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 SPDEFO95238 335 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 ABHD16AO95870 558 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 MYBP10242 640 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 MTHFD1P11586 935 aaKnown RBP5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 MAKP20794 623 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 PRDX5P30044 214 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 PHKA1P46020 1223 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 TIGD2Q4W5G0 525 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 CCDC93Q567U6 631 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 PPP1R3BQ86XI6 285 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 COL23A1Q86Y22 540 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 CELF5Q8N6W0 485 aaKnown RBP5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 DIS3LQ8TF46 1054 aaKnown RBP5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 NUP133Q8WUM0 1156 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 ASB10Q8WXI3 467 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 LRIG1Q96JA1 1093 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 AIFM3Q96NN9 605 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 TAAR9Q96RI9 348 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 CAMKK2Q96RR4 588 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 VKORC1Q9BQB6 163 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 LRFN3Q9BTN0 628 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 PACSIN1Q9BY11 444 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 RNPEPQ9H4A4 650 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 ABCF2Q9UG63 623 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 NR2E3Q9Y5X4 410 aa5.8□□□□□ -1.48
HMGB1P49-201ENST00000418882 GRID2IPA4D2P6 1211 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 OFD1O75665 1012 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 MATN4O95460 622 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 ADH4P08319 380 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 SPATA31D3P0C874 917 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 DDX6P26196 483 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 MCM7P33993 719 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 BMPR1AP36894 532 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 GDF5P43026 501 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 CXADRP78310 365 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 PCSK4Q6UW60 755 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 SPATA31D4Q6ZUB0 917 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 LDLRAD3Q86YD5 345 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 SH2D3CQ8N5H7 860 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 NSUN7Q8NE18 718 aaKnown RBP5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 NLGN4YQ8NFZ3 816 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 TSR2Q969E8 191 aaKnown RBP5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 MAP3K14Q99558 947 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 CGRRF1Q99675 332 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 CDYLQ9Y232 598 aa5.79□□□□□ -1.48
HMGB1P49-201ENST00000418882 GPANK1O95872 356 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 AHSGP02765 367 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 TYRP14679 529 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 VCAM1P19320 739 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 CYP2C19P33261 490 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 NKX6-1P78426 367 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 FHL2Q14192 279 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 PLS1Q14651 629 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 CYP2A13Q16696 494 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 ATP2B3Q16720 1220 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 KCNV1Q6PIU1 500 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 ARHGEF19Q8IW93 802 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 SYNE4Q8N205 404 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 PDPRQ8NCN5 879 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 SLC35G2Q8TBE7 412 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 RNF31Q96EP0 1072 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 ACO2Q99798 780 aaKnown RBP5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 ALOXE3Q9BYJ1 711 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 WDR11Q9BZH6 1224 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 MRPL46Q9H2W6 279 aaKnown RBP5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 SERHL2Q9H4I8 314 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 SLAMF7Q9NQ25 335 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 LMBRD1Q9NUN5 540 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 GABBR1Q9UBS5 961 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 AGAP1Q9UPQ3 857 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 POLHQ9Y253 713 aa5.78□□□□□ -1.48
HMGB1P49-201ENST00000418882 CYR61O00622 381 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 SLC16A6O15403 523 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 CDKL5O76039 1030 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 RPLP2P05387 115 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms