RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 LAMP2P13473 410 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 ATF2P15336 505 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 TKTP29401 623 aaKnown RBP15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 AMPD3Q01432 767 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 CEBPZQ03701 1054 aaKnown RBP15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 MMRN1Q13201 1228 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 STK38Q15208 465 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 VARS2Q5ST30 1063 aaKnown RBP15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 USP49Q70CQ1 688 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 NT5DC4Q86YG4 428 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 LINC00301Q8NCQ3 95 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 LRRC15Q8TF66 581 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 CLIC6Q96NY7 704 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 OLFML3Q9NRN5 406 aa15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 CPSF3Q9UKF6 684 aaKnown RBP15.81■□□□□ 0.12
NIF3L1-205ENST00000409588 LACTBL1A8MY62 500 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 M0QZQ0 153 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 SPTLC2O15270 562 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 FAM189A1O60320 539 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 OAZ2O95190 189 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 LDHAP00338 332 aaKnown RBP15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 CXCL8P10145 99 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 FSHRP23945 695 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 NMT1P30419 496 aaKnown RBP15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 MCM4P33991 863 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 STAT6P42226 847 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 BRCC3P46736 316 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 SPECC1Q5M775 1068 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 SPATA1Q5VX52 437 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 ADALQ6DHV7 355 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 FAM173BQ6P4H8 233 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 TCEAL8Q8IYN2 117 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 BEST2Q8NFU1 509 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 C18orf25Q96B23 403 aaPredicted RBP15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 STRA6Q9BX79 667 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 HAPLN2Q9GZV7 340 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 MRPL44Q9H9J2 332 aaKnown RBP15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 AVENQ9NQS1 362 aaPredicted RBP15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 WNT16Q9UBV4 365 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 DUSP12Q9UNI6 340 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 C2CD2Q9Y426 696 aa15.8■□□□□ 0.12
NIF3L1-205ENST00000409588 MYO10Q9HD67 2058 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 MEFVO15553 781 aaPredicted RBP15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 MICAL2O94851 1124 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 ASGR2P07307 311 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 AVPR2P30518 371 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 CLCN5P51795 746 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 ENOX2Q16206 610 aaKnown RBP15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 SEZ6Q53EL9 994 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 ZNF280DQ6N043 979 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 STXBP4Q6ZWJ1 553 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 DYMQ7RTS9 669 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 SLC7A14Q8TBB6 771 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 DNAJC19Q96DA6 116 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 ACCSQ96QU6 501 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 AGO2Q9UKV8 859 aaKnown RBP15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 CFAP45Q9UL16 551 aa15.79■□□□□ 0.12
NIF3L1-205ENST00000409588 CITO14578 2027 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 FRMD3A2A2Y4 597 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 MYMKA6NI61 221 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 ANHXE9PGG2 379 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 KIAA0391O15091 583 aaKnown RBP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 ADAM12O43184 909 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 CUTAO60888 179 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 PPP1R37O75864 691 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 IL18RAPO95256 599 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 PTPN2P17706 415 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 TYMPP19971 482 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 AARSP49588 968 aaKnown RBP eCLIP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 PTPN5P54829 565 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 ROR1Q01973 937 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 YWHAHQ04917 246 aaPredicted RBP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 ZC2HC1CQ53FD0 456 aaPredicted RBP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 MTSS1LQ765P7 747 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 GRASPQ7Z6J2 395 aaPredicted RBP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 USP37Q86T82 979 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 CCDC65Q8IXS2 484 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 SLC44A3Q8N4M1 653 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 IQUBQ8NA54 791 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 PYM1Q9BRP8 204 aaKnown RBP15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 TNMDQ9H2S6 317 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 FBXL5Q9UKA1 691 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 CDH7Q9ULB5 785 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 TRIP11Q15643 1979 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 PLXNA3P51805 1871 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 DENND4AQ7Z401 1863 aa15.78■□□□□ 0.12
NIF3L1-205ENST00000409588 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 I3L4J1 428 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 PRRG1O14668 218 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 ZNF197O14709 1029 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 LRG1P02750 347 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 MYBP10242 640 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 GARTP22102 1010 aa15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 IGFBP6P24592 240 aaPredicted RBP15.77■□□□□ 0.12
NIF3L1-205ENST00000409588 TNFSF9P41273 254 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms