RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ARL13BQ3SXY8 428 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 SPATS1Q496A3 300 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 RTP2Q5QGT7 225 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 UBXN11Q5T124 520 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ISM2Q6H9L7 571 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 UNC5DQ6UXZ4 953 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 TCP11L2Q8N4U5 519 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 LSM14AQ8ND56 463 aaKnown RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 TMEM52Q8NDY8 209 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 PLBD2Q8NHP8 589 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 NPLOC4Q8TAT6 608 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ADAMTS15Q8TE58 950 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 MUL1Q969V5 352 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ZNF566Q969W8 418 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 GPATCH1Q9BRR8 931 aaKnown RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 SLC12A9Q9BXP2 914 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 C14orf93Q9H972 538 aaKnown RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 PREBQ9HCU5 417 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 MTRRQ9UBK8 725 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 TBK1Q9UHD2 729 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 XPO7Q9UIA9 1087 aaKnown RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 TMEFF2Q9UIK5 374 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ZHX1Q9UKY1 873 aaPredicted RBP5.58□□□□□ -1.52
GABPB1-204ENST00000396464 SLC39A10Q9ULF5 831 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 ZNF711Q9Y462 761 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 PMF1-BGLAPU3KQ54 211 aa5.58□□□□□ -1.52
GABPB1-204ENST00000396464 C17orf113A0A1B0GUU1 675 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 H0Y8X5 98 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ARHGAP6O43182 974 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SGPL1O95470 568 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ADRB2P07550 413 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 TPM2P07951 284 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 DBHP09172 617 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 LCP1P13796 627 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 EDNRBP24530 442 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 MC4RP32245 332 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 HOXD13P35453 343 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 POLD2P49005 469 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ZNF132P52740 706 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SLC16A1P53985 500 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SLURP1P55000 103 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 IRF9Q00978 393 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 MAPK7Q13164 816 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CUL4AQ13619 759 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 KIZQ2M2Z5 673 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CT83Q5H943 113 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 FSTL4Q6MZW2 842 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ESRP1Q6NXG1 681 aaKnown RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 RPUSD3Q6P087 351 aaKnown RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 MCM10Q7L590 875 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 KRT74Q7RTS7 529 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CABP7Q86V35 215 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CCDC103Q8IW40 242 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ZUFSPQ96AP4 578 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 IWS1Q96ST2 819 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 DHX36Q9H2U1 1008 aaKnown RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 LIMCH1Q9UPQ0 1083 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ADAMTS20P59510 1910 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 AQP12BA6NM10 295 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 FFAR3O14843 346 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 GSTA4O15217 222 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 MEFVO15553 781 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SRGAP3O43295 1099 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 HTRA2O43464 458 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CLEC2LP0C7M8 214 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 MSL3P1P0C860 447 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ALOX15P16050 662 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 TACR1P25103 407 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 PTX3P26022 381 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CASP6P55212 293 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 HSD17B7P56937 341 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 FOXO4P98177 505 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CAP1Q01518 475 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 POU4F1Q01851 419 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 TESK1Q15569 626 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 TSTQ16762 297 aaKnown RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 C3orf36Q3SXR2 165 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ANKRD45Q5TZF3 282 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 B4GALNT4Q76KP1 1039 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 C16orf59Q7L2K0 433 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 DNAJB7Q7Z6W7 309 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SDCCAG8Q86SQ7 713 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 C2CD5Q86YS7 1000 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 TSPYL6Q8N831 410 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 TP53I13Q8NBR0 393 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SPPL3Q8TCT6 385 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ANKS1AQ92625 1134 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 COPS5Q92905 334 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 SPATA17Q96L03 361 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 NCAPGQ9BPX3 1015 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 PCIF1Q9H4Z3 704 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 GRPEL1Q9HAV7 217 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 ZNF287Q9HBT7 754 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 GPRC5CQ9NQ84 441 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 DIAPH3Q9NSV4 1193 aa5.57□□□□□ -1.52
GABPB1-204ENST00000396464 GJB4Q9NTQ9 266 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms