RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 NOP9Q86U38 636 aaKnown RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 C12orf56Q8IXR9 622 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 LRRC71Q8N4P6 559 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 TMEM161BQ8NDZ6 487 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 DNERQ8NFT8 737 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 EPS8L1Q8TE68 723 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 PRPF31Q8WWY3 499 aaKnown RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 CYFIP2Q96F07 1278 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 NCAPGQ9BPX3 1015 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ROPN1BQ9BZX4 212 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 SNX25Q9H3E2 840 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ROPN1Q9HAT0 212 aaPredicted RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 A1CFQ9NQ94 594 aaKnown RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 RNF181Q9P0P0 153 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 WDR35Q9P2L0 1181 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 MYH7P12883 1935 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 GAS2O43903 313 aaKnown RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 CDH16O75309 829 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 WEE2P0C1S8 567 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 RALAP11233 206 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 PTPRAP18433 802 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ARSEP51690 589 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 CENPCQ03188 943 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 STAT4Q14765 748 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 KYNUQ16719 465 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 CDO1Q16878 200 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 CLEC16AQ2KHT3 1053 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 SEZ6Q53EL9 994 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 C2CD6Q53TS8 623 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 SCFD2Q8WU76 684 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ATP2A3Q93084 1043 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 KLHL29Q96CT2 875 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 XPO6Q96QU8 1125 aaKnown RBP6.95□□□□□ -1.3
BDNF-203ENST00000395978 FOXP3Q9BZS1 431 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 STK38LQ9Y2H1 464 aa6.95□□□□□ -1.3
BDNF-203ENST00000395978 ASTN2O75129 1339 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 M0QYV0 167 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 HBP1O60381 514 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 ZBED1O96006 694 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 RARGP13631 454 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 SPARCL1Q14515 664 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 FAM133BQ5BKY9 247 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 ATF7IP2Q5U623 682 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 GPAT2Q6NUI2 795 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 CCDC62Q6P9F0 684 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PDZD4Q76G19 769 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 FAM71AQ8IYT1 594 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 OR6B3Q8NGW1 331 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 SHC3Q92529 594 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 C9orf72Q96LT7 481 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 MCEEQ96PE7 176 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 RBM15Q96T37 977 aaKnown RBP eCLIP6.94□□□□□ -1.3
BDNF-203ENST00000395978 MED10Q9BTT4 135 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PITPNM3Q9BZ71 974 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 KLHL11Q9NVR0 708 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 WNK3Q9BYP7 1800 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 MAGEB2O15479 319 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PROSCO94903 275 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 ADRB2P07550 413 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PYGMP11217 842 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 CHN1P15882 459 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 R3HDM1Q15032 1099 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 LRRC14Q15048 493 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 FAM102AQ5T9C2 384 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 HIBCHQ6NVY1 386 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 ZNF354CQ86Y25 554 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 MCOLN2Q8IZK6 566 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 MREGQ8N565 214 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 GBP7Q8N8V2 638 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 MCUR1Q96AQ8 359 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 HES6Q96HZ4 224 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 CGRRF1Q99675 332 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 MLXIPLQ9NP71 852 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 NOD1Q9Y239 953 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PCDHA3Q9Y5H8 950 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 CICQ96RK0 1608 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 NCANO14594 1321 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 GOLGA8MH3BSY2 632 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 TGFB3P10600 412 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 ARL4AP40617 200 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 ITGA8P53708 1063 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 CORO7P57737 925 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 MRPS9P82933 396 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 PDIA2Q13087 525 aaKnown RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 PSMD6Q15008 389 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 SNCBQ16143 134 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 GPR162Q16538 588 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 KYAT1Q16773 422 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 LONRF1Q17RB8 773 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 PPP6R3Q5H9R7 873 aaPredicted RBP6.94□□□□□ -1.3
BDNF-203ENST00000395978 SPOPLQ6IQ16 392 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 TMC3Q7Z5M5 1100 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 ABRAQ8N0Z2 381 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 VPS52Q8N1B4 723 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 CCDC110Q8TBZ0 833 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 ATG4AQ8WYN0 398 aa6.94□□□□□ -1.3
BDNF-203ENST00000395978 KRT35Q92764 455 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms