RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 XYLT2Q9H1B5 865 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 TXNRD2Q9NNW7 524 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 DDX20Q9UHI6 824 aaKnown RBP16.42■□□□□ 0.22
CPSF7-202ENST00000394888 FOXO6A8MYZ6 492 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 PROSCO94903 275 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 DRD4P21917 467 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 KLRC2P26717 231 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 PTK6Q13882 451 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 PRUNE1Q86TP1 453 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 RIOX2Q8IUF8 465 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 RBAKQ9NYW8 714 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-202ENST00000394888 RPL7AP62424 266 aaKnown RBP16.42■□□□□ 0.22
CPSF7-202ENST00000394888 AUHQ13825 339 aaKnown RBP16.42■□□□□ 0.22
CPSF7-202ENST00000394888 CLUL1Q15846 466 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 CYTH4Q9UIA0 394 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 C3orf70A6NLC5 250 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-202ENST00000394888 PODXLO00592 558 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 ADCY3O60266 1144 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 KRT5P13647 590 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 PASD1Q8IV76 773 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 ARFGAP1Q8N6T3 406 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 ZNF638Q14966 1978 aaKnown RBP16.41■□□□□ 0.22
CPSF7-202ENST00000394888 IRF6O14896 467 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 LIG4P49917 911 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 POLGP54098 1239 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-202ENST00000394888 STXBP2Q15833 593 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 LY6KQ17RY6 165 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 CHST13Q8NET6 341 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 ASS1P00966 412 aaKnown RBP16.41■□□□□ 0.22
CPSF7-202ENST00000394888 HOXC6P09630 235 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 RARGP13631 454 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 CREB1P16220 341 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 ATP13A4Q4VNC1 1196 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 GGA2Q9UJY4 613 aa16.41■□□□□ 0.22
CPSF7-202ENST00000394888 LGR5O75473 907 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 MMP8P22894 467 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 KRT17Q04695 432 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 YTHDF3Q7Z739 585 aaKnown RBP16.4■□□□□ 0.22
CPSF7-202ENST00000394888 TFAP2BQ92481 460 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 FAM212AQ96EL1 285 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 KIAA1586Q9HCI6 787 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 C1orf112Q9NSG2 853 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 A6NNZ2 444 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 GCAP28676 217 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 PIK3CAP42336 1068 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 ASPAP45381 313 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 HSDL1Q3SXM5 330 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 TUBB8Q3ZCM7 444 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 SEPT14Q6ZU15 432 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 TRIM50Q86XT4 487 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 CENPTQ96BT3 561 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 FAM118BQ9BPY3 351 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 OSBPL7Q9BZF2 842 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 CEP350Q5VT06 3117 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 SPOPO43791 374 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 MAPK4P31152 587 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 EIF3BP55884 814 aaKnown RBP16.4■□□□□ 0.22
CPSF7-202ENST00000394888 NOP14P78316 857 aaKnown RBP16.4■□□□□ 0.22
CPSF7-202ENST00000394888 SEL1L2Q5TEA6 688 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 ACO2Q99798 780 aaKnown RBP16.4■□□□□ 0.22
CPSF7-202ENST00000394888 RASSF4Q9H2L5 321 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 CDC42EP4Q9H3Q1 356 aaKnown RBP16.4■□□□□ 0.22
CPSF7-202ENST00000394888 WHRNQ9P202 907 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 CPSF3Q9UKF6 684 aaKnown RBP16.4■□□□□ 0.22
CPSF7-202ENST00000394888 PPP2R3BQ9Y5P8 575 aa16.4■□□□□ 0.22
CPSF7-202ENST00000394888 NDUFAB1O14561 156 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 GJB1P08034 283 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 KRT71Q3SY84 523 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 BRSK2Q8IWQ3 736 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 TMEM192Q8IY95 271 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 KATNAL2Q8IYT4 538 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-202ENST00000394888 PRPF31Q8WWY3 499 aaKnown RBP16.39■□□□□ 0.21
CPSF7-202ENST00000394888 GPR20Q99678 358 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 AZI2Q9H6S1 392 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 TJP2Q9UDY2 1190 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 CD2APQ9Y5K6 639 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 MYBL1P10243 752 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 RALAP11233 206 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 CDH5P33151 784 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-202ENST00000394888 CITO14578 2027 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 A0A0G2JLL6 359 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-202ENST00000394888 MPP2Q14168 576 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 MAMDC4Q6UXC1 1216 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 RUFY4Q6ZNE9 571 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 MMS22LQ6ZRQ5 1243 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 PRRT2Q7Z6L0 340 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-202ENST00000394888 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 KIAA0319LQ8IZA0 1049 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 IFT74Q96LB3 600 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 FAM129AQ9BZQ8 928 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 CCDC134Q9H6E4 229 aa16.39■□□□□ 0.21
CPSF7-202ENST00000394888 MINDY3Q9H8M7 445 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms