RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 EIF3EP60228 445 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 KDSRQ06136 332 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 SPARCL1Q14515 664 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 KIAA1841Q6NSI8 718 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 LRP10Q7Z4F1 713 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 PRUNE1Q86TP1 453 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 LCA5Q86VQ0 697 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 ZNF473Q8WTR7 871 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 BHMTQ93088 406 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 POLR3CQ9BUI4 534 aaPredicted RBP9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 MTMR12Q9C0I1 747 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 VCX3BQ9H321 246 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 PIN4Q9Y237 131 aaKnown RBP9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 CNTNAP4Q9C0A0 1308 aa9.63□□□□□ -0.87
SMARCA1-202ENST00000371122 KCNN4O15554 427 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 DIAPH2O60879 1101 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 NPTX2P47972 431 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 ACTR2P61160 394 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 DNAJC3Q13217 504 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 GRAMD1BQ3KR37 738 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 COBLL1Q53SF7 1204 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 XKR3Q5GH77 459 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 ATP6V1E2Q96A05 226 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 MMP19Q99542 508 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 NUF2Q9BZD4 464 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 MYH14Q7Z406 1995 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 GRID2IPA4D2P6 1211 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 HMBSP08397 361 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 CAP2P40123 477 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 RAP1GAPP47736 663 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 CNTN2Q02246 1040 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 JADE1Q6IE81 842 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 SPON2Q9BUD6 331 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 TLR10Q9BXR5 811 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 CNOT10Q9H9A5 744 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 SARS2Q9NP81 518 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 TAS2R14Q9NYV8 317 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 TMEM120BA0PK00 339 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 TARSL2A2RTX5 802 aaKnown RBP9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 GYG2O15488 501 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 HUS1O60921 280 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 ENTPD3O75355 529 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 NPTXRO95502 500 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 DLG4P78352 724 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 ALCAMQ13740 583 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 ECM1Q16610 540 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 FAM117BQ6P1L5 589 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC5A5Q92911 643 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 FAM136AQ96C01 138 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 SEMA4AQ9H3S1 761 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 NPHS2Q9NP85 383 aa9.62□□□□□ -0.87
SMARCA1-202ENST00000371122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 RBP3P10745 1247 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 PHKA2P46019 1235 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 RHBDL3P58872 404 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 PDE1CQ14123 709 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 EML3Q32P44 896 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 CBWD6Q4V339 395 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 CBWD3Q5JTY5 395 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 CBWD5Q5RIA9 395 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 LLGL2Q6P1M3 1020 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SV2AQ7L0J3 742 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 FAM71DQ8N9W8 422 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 RBM41Q96IZ5 413 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 GBP5Q96PP8 586 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ERP44Q9BS26 406 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 CEP41Q9BYV8 373 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ANKRD36CQ5JPF3 1778 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 PLSCR1O15162 318 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 EIF3HO15372 352 aaKnown RBP eCLIP9.61□□□□□ -0.877e-7■□□□□ 9.9
SMARCA1-202ENST00000371122 CAND2O75155 1236 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 MX2P20592 715 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 POLE2P56282 527 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 TTLL4Q14679 1199 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 EFCAB12Q6NXP0 572 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC17A8Q8NDX2 589 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 OR6P1Q8NGX9 317 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 RNF139Q8WU17 664 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 RAB3IPQ96QF0 476 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 EDEM3Q9BZQ6 932 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 WNT8AQ9H1J5 351 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 TBX20Q9UMR3 447 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 LOC100653049A0A140TA62 436 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 NEMP1O14524 444 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 WDR46O15213 610 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 KRT34O76011 436 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SLITRK3O94933 977 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 C6orf222P0C671 652 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 CDH8P55286 799 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 TMTC4Q5T4D3 741 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 PDZD4Q76G19 769 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ZNF720Q7Z2F6 126 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms