RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NUP85Q9BW27 656 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 SEPT11Q9NVA2 429 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CHCHD3Q9NX63 227 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 ATXN10Q9UBB4 475 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 DCTN4Q9UJW0 460 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 GCNT3O95395 438 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CRABP2P29373 138 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 ATP5DP30049 168 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CDK7P50613 346 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CALCOCO2Q13137 446 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 PHLDB2Q86SQ0 1253 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 STRA6Q9BX79 667 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 VCXQ9H320 206 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 NKIRAS1Q9NYS0 192 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
SMARCA1-201ENST00000371121 CAPN14A8MX76 684 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 MEIS2O14770 477 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 ZNF862O60290 1169 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 RPA1P27694 616 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SERPINB3P29508 390 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 GPX6P59796 221 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 USP46P62068 366 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 CDC16Q13042 620 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 CLUL1Q15846 466 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 PCNX4Q63HM2 1172 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 TDRPQ86YL5 185 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 BHMT2Q9H2M3 363 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 TRABDQ9H4I3 376 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 OLFML3Q9NRN5 406 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 ASIC3Q9UHC3 531 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 PLIN4Q96Q06 1357 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 EIF6P56537 245 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 PPP4CP60510 307 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 THOC5Q13769 683 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 GRM2Q14416 872 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 RINT1Q6NUQ1 792 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SDCCAG8Q86SQ7 713 aaPredicted RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 NR1H4Q96RI1 486 aaPredicted RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SLX1AQ9BQ83 275 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 CFAP69A5D8W1 941 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 DNAJC6O75061 913 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 ZBED4O75132 1171 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 ZSCAN5DPP0CG00 497 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 PIK3CAP42336 1068 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 RHBDL3P58872 404 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 SPARCL1Q14515 664 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 LRRC6Q86X45 466 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 MYLK4Q86YV6 388 aaPredicted RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 HEY2Q9UBP5 337 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 UTRNP46939 3433 aa12.38□□□□□ -0.43
SMARCA1-201ENST00000371121 VILLO15195 856 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 SORBS2O94875 1100 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 SKIP12755 728 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 ETS1P14921 441 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 CYP4A11Q02928 519 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 GSTA3Q16772 222 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 CYP4F22Q6NT55 531 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 LVRNQ6Q4G3 990 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 AGPAT3Q9NRZ7 376 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 MTMR4Q9NYA4 1195 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 ARMCX1Q9P291 453 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 PDP2Q9P2J9 529 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 ZNF212Q9UDV6 495 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 BLOC1S6Q9UL45 172 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 ASLP04424 464 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 ABHD2P08910 425 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 PABPC4LP0CB38 370 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 TM4SF1P30408 202 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 MAGEA4P43358 317 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 RAP1GDS1P52306 607 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 PLOD1Q02809 727 aaPredicted RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 HNRNPDQ14103 355 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 FBXL19Q6PCT2 694 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 IZUMO2Q6UXV1 221 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 SH2D5Q6ZV89 423 aa12.37□□□□□ -0.43
SMARCA1-201ENST00000371121 SATL1Q86VE3 508 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms