RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 THAP2Q9H0W7 228 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 CCDC195A0A1B0GUA6 201 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 GTPBP10A4D1E9 387 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 ICAM1P05362 532 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 RBP3P10745 1247 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 IL1RL1Q01638 556 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 NME3Q13232 169 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 TMEM132DQ14C87 1099 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 NDUFAF2Q8N183 169 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 NRBF2Q96F24 287 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZBTB7AO95365 584 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 SERPINB9P50453 376 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 HSD17B4P51659 736 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 SEC24CP53992 1094 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 HERVK_113P62684 666 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 MYBPC2Q14324 1141 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 PTGISQ16647 500 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 ACAD10Q6JQN1 1059 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 RANBP17Q9H2T7 1088 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 PAK5Q9P286 719 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 DMGDHQ9UI17 866 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 AGGF1Q8N302 714 aaeCLIP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 SCFD1Q8WVM8 642 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 TARS2Q9BW92 718 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 PRMT7Q9NVM4 692 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 EHD2Q9NZN4 543 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 DCCP43146 1447 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 RSPH10B2B2RC85 870 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 RGL2O15211 777 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 RSPH10BP0C881 870 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 POU5F1BQ06416 359 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 TRPM8Q7Z2W7 1104 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 IFT43Q96FT9 208 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 FRMD8Q9BZ67 464 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 ITGA8P53708 1063 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 RAD23BP54727 409 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 PRAMEP78395 509 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 PHEXP78562 749 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 NFIAQ12857 509 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 TSC22D3Q99576 134 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 MROH1Q8NDA8 1641 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 ATMINO43313 823 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 EEF1B2P24534 225 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 SESN2P58004 480 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZNF200P98182 395 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 KDM7AQ6ZMT4 941 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 SAMD3Q8N6K7 520 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 ACTRT1Q8TDG2 376 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 OLFML3Q9NRN5 406 aa17.98■□□□□ 0.47
TRAPPC11-201ENST00000334690 MROH2AA6NES4 1674 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 A0A0A6YYK5 440 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 CST8O60676 142 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 CHST13Q8NET6 341 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 TSSK1BQ9BXA7 367 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 TMEM39BQ9GZU3 492 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 GOLGA8RI6L899 631 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 PIK3R2O00459 728 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 CLGNO14967 610 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 ANO5Q75V66 913 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 C4orf33Q8N1A6 199 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 CASKIN2Q8WXE0 1202 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 SERPINB12Q96P63 405 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 NT5C1AQ9BXI3 368 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 UNC45AQ9H3U1 944 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 FAM237AA0A1B0GTK4 181 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 GAS2O43903 313 aaKnown RBP17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 STMN1P16949 149 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 TBX2Q13207 712 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 C3orf20Q8ND61 904 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 AGBL3Q8NEM8 1001 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 OR6P1Q8NGX9 317 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 FBXO28Q9NVF7 368 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 POLLQ9UGP5 575 aa17.97■□□□□ 0.47
TRAPPC11-201ENST00000334690 TRIM66O15016 1216 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 CASP4P49662 377 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 PGBD4Q96DM1 585 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 MED15Q96RN5 788 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 SIK2Q9H0K1 926 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 TSPYL2Q9H2G4 693 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 ATF7IP2Q5U623 682 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 RASSF3Q86WH2 238 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 RNF168Q8IYW5 571 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 XPO7Q9UIA9 1087 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 PFDN1O60925 122 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 AKAP3O75969 853 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 APOEP02649 317 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 RALAP11233 206 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 PGM1P36871 562 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 RAPGEF5Q92565 580 aa17.96■□□□□ 0.47
TRAPPC11-201ENST00000334690 ATG4CQ96DT6 458 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms