RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SNX21Q969T3 373 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 HVCN1Q96D96 273 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 KIF12Q96FN5 646 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 MSTO1Q9BUK6 570 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 MFSD1Q9H3U5 465 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 ZHX3Q9H4I2 956 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 TUBGCP4Q9UGJ1 667 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 FBXL5Q9UKA1 691 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 CPSF3Q9UKF6 684 aaKnown RBP19.31■□□□□ 0.68
HDDC3-201ENST00000330334 WDR27A2RRH5 827 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 GALR2O43603 387 aaPredicted RBP19.3■□□□□ 0.68
HDDC3-201ENST00000330334 OAZ2O95190 189 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 NMT1P30419 496 aaKnown RBP19.3■□□□□ 0.68
HDDC3-201ENST00000330334 ELF1P32519 619 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 TNFSF9P41273 254 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 CCDC73Q6ZRK6 1079 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 SV2BQ7L1I2 683 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 TMEM105Q8N8V8 129 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 FGF13Q92913 245 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 USP28Q96RU2 1077 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 STRA6Q9BX79 667 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
HDDC3-201ENST00000330334 FBXL21Q9UKT6 434 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 POLIQ9UNA4 740 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 DERAQ9Y315 318 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 KMT2EQ8IZD2 1858 aa19.3■□□□□ 0.68
HDDC3-201ENST00000330334 PPP1R37O75864 691 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 NPR3P17342 541 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 GAP43P17677 238 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 NASPP49321 788 aaPredicted RBP19.29■□□□□ 0.68
HDDC3-201ENST00000330334 NTHL1P78549 312 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 CEBPZQ03701 1054 aaKnown RBP19.29■□□□□ 0.68
HDDC3-201ENST00000330334 CTXN3Q4LDR2 81 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 PABPC1LQ4VXU2 614 aaKnown RBP19.29■□□□□ 0.68
HDDC3-201ENST00000330334 ZBTB41Q5SVQ8 909 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 SPATA1Q5VX52 437 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 ZNF280DQ6N043 979 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 MTSS1LQ765P7 747 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 ALYREFQ86V81 257 aaKnown RBP19.29■□□□□ 0.68
HDDC3-201ENST00000330334 DNAJC19Q96DA6 116 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 ASB7Q9H672 318 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 SLC2A4RGQ9NR83 387 aa19.29■□□□□ 0.68
HDDC3-201ENST00000330334 MYMKA6NI61 221 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
HDDC3-201ENST00000330334 MICAL2O94851 1124 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 PTPN2P17706 415 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 AOC1P19801 751 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 MRE11P49959 708 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 SPAG1Q07617 926 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 POSTNQ15063 836 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 ZC2HC1CQ53FD0 456 aaPredicted RBP19.28■□□□□ 0.68
HDDC3-201ENST00000330334 SIX5Q8N196 739 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 ITFG1Q8TB96 612 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 RTP3Q9BQQ7 232 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 GDE1Q9NZC3 331 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 AFF4Q9UHB7 1163 aaKnown RBP19.28■□□□□ 0.68
HDDC3-201ENST00000330334 NUMBLQ9Y6R0 609 aa19.28■□□□□ 0.68
HDDC3-201ENST00000330334 ANKRD63C9JTQ0 380 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 PRRG1O14668 218 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 LRG1P02750 347 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 YWHAHQ04917 246 aaPredicted RBP19.27■□□□□ 0.68
HDDC3-201ENST00000330334 CWF19L1Q69YN2 538 aaKnown RBP19.27■□□□□ 0.68
HDDC3-201ENST00000330334 ADALQ6DHV7 355 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 SFR1Q86XK3 245 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 BEST2Q8NFU1 509 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 OLFML3Q9NRN5 406 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 HCFC1R1Q9NWW0 138 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 C2CD2Q9Y426 696 aa19.27■□□□□ 0.68
HDDC3-201ENST00000330334 DOCK6Q96HP0 2047 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 FRMD3A2A2Y4 597 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 KRBA1A5PL33 1030 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 RHOP08100 348 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 CFHP08603 1231 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 TYMPP19971 482 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 ARPP19P56211 112 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 LILRA4P59901 499 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 JADE1Q6IE81 842 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 PHLDB3Q6NSJ2 640 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 PARM1Q6UWI2 310 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 NPAS3Q8IXF0 933 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 LINC00301Q8NCQ3 95 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 FLCNQ8NFG4 579 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 FGF14Q92915 247 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 MRPL44Q9H9J2 332 aaKnown RBP19.26■□□□□ 0.67
HDDC3-201ENST00000330334 CYP4F11Q9HBI6 524 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 AGO2Q9UKV8 859 aaKnown RBP19.26■□□□□ 0.67
HDDC3-201ENST00000330334 EXOC7Q9UPT5 735 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 MRPS23Q9Y3D9 190 aaKnown RBP19.26■□□□□ 0.67
HDDC3-201ENST00000330334 PCDHB13Q9Y5F0 798 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 INSL5Q9Y5Q6 135 aa19.26■□□□□ 0.67
HDDC3-201ENST00000330334 PDCD11Q14690 1871 aaKnown RBP19.26■□□□□ 0.67
HDDC3-201ENST00000330334 ANO9A1A5B4 782 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 OR6C75A6NL08 312 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 PIRO00625 290 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 ZNF197O14709 1029 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 PPP6R2O75170 966 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 SEC24AO95486 1093 aa19.25■□□□□ 0.67
HDDC3-201ENST00000330334 ADSSP30520 456 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms