RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 FGD4Q96M96 766 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 TRIM7Q9C029 511 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 MTRF1LQ9UGC7 380 aaKnown RBP16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 LRRC37A2A6NM11 1700 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 CXCL11O14625 94 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 MSCO60682 206 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 TOM1L1O75674 476 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 PGK2P07205 417 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 RARAP10276 462 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 MARK3P27448 753 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 GUCY1A3Q02108 690 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 MXD4Q14582 209 aaPredicted RBP16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 ZDHHC24Q6UX98 284 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 MON1BQ7L1V2 547 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 PHLDB2Q86SQ0 1253 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 BRSK2Q8IWQ3 736 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 CCDC113Q9H0I3 377 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 MRPL47Q9HD33 250 aaKnown RBP16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 TXNRD2Q9NNW7 524 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 CNTN6Q9UQ52 1028 aa16.68■□□□□ 0.26
TSC22D3-201ENST00000315660 UMODL1Q5DID0 1318 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 CFHP08603 1231 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 HSDL1Q3SXM5 330 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 LLGL2Q6P1M3 1020 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 TRIM50Q86XT4 487 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 ABRAQ8N0Z2 381 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 OTUD6BQ8N6M0 293 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 C12orf50Q8NA57 414 aaPredicted RBP16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 RBBP8NLQ8NC74 664 aaPredicted RBP16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 VCPIP1Q96JH7 1222 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 GPR20Q99678 358 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 GRHL1Q9NZI5 618 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 PASKQ96RG2 1323 aa16.67■□□□□ 0.26
TSC22D3-201ENST00000315660 FAM189A1O60320 539 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 LGR5O75473 907 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 TNFSF9P41273 254 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 LAMTOR4Q0VGL1 99 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 GRM1Q13255 1194 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 PTGISQ16647 500 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 MAPK6Q16659 721 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 C2CD6Q53TS8 623 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 AGBL2Q5U5Z8 902 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 FBXW10Q5XX13 1052 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 CDCA2Q69YH5 1023 aaPredicted RBP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ZBTB33Q86T24 672 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 FBXO25Q8TCJ0 367 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 FAM129AQ9BZQ8 928 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 LRRC19Q9H756 370 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ADAM22Q9P0K1 906 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 AGTPBP1Q9UPW5 1226 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ZBTB42B2RXF5 422 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 FSCN2O14926 492 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 SBF1O95248 1867 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ECEL1O95672 775 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 SRGAP2CP0DJJ0 459 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 NF2P35240 595 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 RPL21P46778 160 aaKnown RBP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 PMS2P54278 862 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 NOMO3P69849 1222 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 KRT71Q3SY84 523 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 SGO2Q562F6 1265 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ODF2Q5BJF6 829 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 CELF3Q5SZQ8 465 aaKnown RBP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 PASD1Q8IV76 773 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 ACO2Q99798 780 aaKnown RBP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 JPH2Q9BR39 696 aaPredicted RBP16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 C2orf40Q9H1Z8 148 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 RBPJLQ9UBG7 517 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 SCINQ9Y6U3 715 aa16.66■□□□□ 0.26
TSC22D3-201ENST00000315660 THAP12O43422 761 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 HNRNPH1P31943 449 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 MDH1P40925 334 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 KCTD2Q14681 263 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 SURF1Q15526 300 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 Q3C1V9 767 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 PLPPR4Q7Z2D5 763 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 HOOK3Q86VS8 718 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 LRRC71Q8N4P6 559 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 RNF149Q8NC42 400 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 ZNF473Q8WTR7 871 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 C11orf70Q9BRQ4 267 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 PABPC3Q9H361 631 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
TSC22D3-201ENST00000315660 CAPN7Q9Y6W3 813 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms