RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 MYL2P10916 166 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 PRKCQQ04759 706 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 KNOP1Q1ED39 458 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 IPMKQ8NFU5 416 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 RIN2Q8WYP3 895 aaPredicted RBP13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 LIMA1Q9UHB6 759 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 DMPKQ09013 629 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 TRIM16LQ309B1 348 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 RESP18Q5W5W9 173 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 FAM160B2Q86V87 743 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 CATSPER1Q8NEC5 780 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 IMPAD1Q9NX62 359 aa13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 PIN4Q9Y237 131 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-201ENST00000262215 GSTM1P09488 218 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 FOSL2P15408 326 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 SCP2P22307 547 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 CSNK2BP67870 215 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 SMTNL2Q2TAL5 461 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 OMA1Q96E52 524 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 THUMPD3Q9BV44 507 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 PARVAQ9NVD7 372 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ZC3H7BQ9UGR2 993 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 CFAP73A6NFT4 308 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 AP3B1O00203 1094 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 CYBBP04839 570 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 IFNAR1P17181 557 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 KLC1Q07866 573 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 BCL2L14Q9BZR8 327 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 FYNP06241 537 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ITGAXP20702 1163 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 TXNRD1Q16881 649 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 KAT2BQ92831 832 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ACSF2Q96CM8 615 aaPredicted RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 KRT84Q9NSB2 600 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 FAM49BQ9NUQ9 324 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 GPSM2P81274 684 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 NLRP10Q86W26 655 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ZNF473Q8WTR7 871 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 SPRTNQ9H040 489 aaPredicted RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 DDX56Q9NY93 547 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ACOT2P49753 483 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 WDR72Q3MJ13 1102 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 TTC33Q6PID6 262 aaPredicted RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 SESN1Q9Y6P5 492 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ARF5P84085 180 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 UNC45BQ8IWX7 931 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 ATPAF2Q8N5M1 289 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-201ENST00000262215 FOXN1O15353 648 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 DDX5P17844 614 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 PBLDP30039 288 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 SPTLC1O15269 473 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 NUP62P37198 522 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 CCDC134Q9H6E4 229 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 ARL2BPQ9Y2Y0 163 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 CYP7B1O75881 506 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 IRX1P78414 480 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 GALNTL6Q49A17 601 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 RCSD1Q6JBY9 416 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MCEEQ96PE7 176 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 LXNQ9BS40 222 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MYBL1P10243 752 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 ARMC6Q6NXE6 501 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 UTS2BQ765I0 119 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 C16orf62Q7Z3J2 963 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MCPH1Q8NEM0 835 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 ECSITQ9BQ95 431 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MRPL39Q9NYK5 338 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 AGO2Q9UKV8 859 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 BLOC1S6Q9UL45 172 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 VSNL1P62760 191 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 RASGRF1Q13972 1273 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 GID8Q9NWU2 228 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 TBXAS1P24557 533 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 PRIM2P49643 509 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 KCNK10P57789 538 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 MMP19Q99542 508 aa13.03□□□□□ -0.32
ARFGEF1-201ENST00000262215 PTPRHQ9HD43 1115 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms