RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 FGFR3P22607 806 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 PSMA5P28066 241 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 CLK2P49760 499 aaKnown RBP16.07■□□□□ 0.16
RABEPK-201ENST00000259460 ATXN3P54252 364 aaPredicted RBP16.07■□□□□ 0.16
RABEPK-201ENST00000259460 GRSF1Q12849 480 aaKnown RBP eCLIP16.07■□□□□ 0.16
RABEPK-201ENST00000259460 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 PLA2G4FQ68DD2 849 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 IQCEQ6IPM2 695 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 DCBLD2Q96PD2 775 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 GTPBP2Q9BX10 602 aaKnown RBP16.07■□□□□ 0.16
RABEPK-201ENST00000259460 FSCN3Q9NQT6 498 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 ASAH2Q9NR71 780 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
RABEPK-201ENST00000259460 ATXN2Q99700 1313 aaKnown RBP16.07■□□□□ 0.16
RABEPK-201ENST00000259460 MAP3K13O43283 966 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 STBD1O95210 358 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 CYP3A4P08684 503 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 CPA1P15085 419 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 JAK3P52333 1124 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 ARMCX6Q7L4S7 300 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 DHX32Q7L7V1 743 aaKnown RBP16.06■□□□□ 0.16
RABEPK-201ENST00000259460 SCUBE3Q8IX30 993 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 SHKBP1Q8TBC3 707 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 CRYGNQ8WXF5 182 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 KCNB2Q92953 911 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 DDX27Q96GQ7 796 aaKnown RBP16.06■□□□□ 0.16
RABEPK-201ENST00000259460 JPH2Q9BR39 696 aaPredicted RBP16.06■□□□□ 0.16
RABEPK-201ENST00000259460 UNC45AQ9H3U1 944 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 DKK4Q9UBT3 224 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 EBF1Q9UH73 591 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 NAP1L2Q9ULW6 460 aaPredicted RBP16.06■□□□□ 0.16
RABEPK-201ENST00000259460 BACE2Q9Y5Z0 518 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 MUC22E2RYF6 1773 aaPredicted RBP16.06■□□□□ 0.16
RABEPK-201ENST00000259460 PTPN13Q12923 2485 aa16.06■□□□□ 0.16
RABEPK-201ENST00000259460 EGFP01133 1207 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
RABEPK-201ENST00000259460 AXLP30530 894 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 SFNP31947 248 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 HNRNPDQ14103 355 aaKnown RBP16.05■□□□□ 0.16
RABEPK-201ENST00000259460 DMC1Q14565 340 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 MAPK6Q16659 721 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 USP39Q53GS9 565 aaKnown RBP16.05■□□□□ 0.16
RABEPK-201ENST00000259460 TMTC3Q6ZXV5 915 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 RNF149Q8NC42 400 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 RPLP0P6Q8NHW5 317 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 ZNF461Q8TAF7 563 aa16.05■□□□□ 0.16
RABEPK-201ENST00000259460 PRPF31Q8WWY3 499 aaKnown RBP16.05■□□□□ 0.16
RABEPK-201ENST00000259460 PSPC1Q8WXF1 523 aaKnown RBP16.05■□□□□ 0.16
RABEPK-201ENST00000259460 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
RABEPK-201ENST00000259460 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 DDX11L8A8MPP1 907 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 DPYSL4O14531 572 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 CAPN9O14815 690 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 GAS7O60861 476 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 OPHN1O60890 802 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 SEC24AO95486 1093 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 NPTXRO95502 500 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 CFIP05156 583 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 ARPP19P56211 112 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 SRSF1Q07955 248 aaKnown RBP eCLIP16.04■□□□□ 0.162e-7■■□□□ 12.9
RABEPK-201ENST00000259460 LAMTOR4Q0VGL1 99 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 TRIP6Q15654 476 aaKnown RBP16.04■□□□□ 0.16
RABEPK-201ENST00000259460 ITPRIPL2Q3MIP1 535 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 ANKS3Q6ZW76 656 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 LEMD2Q8NC56 503 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 LSM14AQ8ND56 463 aaKnown RBP16.04■□□□□ 0.16
RABEPK-201ENST00000259460 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
RABEPK-201ENST00000259460 CAMK1GQ96NX5 476 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 LRRC3BQ96PB8 259 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 GPR88Q9GZN0 384 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 PI4KAP42356 2102 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
RABEPK-201ENST00000259460 PCDH15Q96QU1 1955 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 LIFRP42702 1097 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 EPHA5P54756 1037 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 CFHR1Q03591 330 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 CYP4F3Q08477 520 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 TWF1Q12792 350 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 STXBP5Q5T5C0 1151 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 Q6ZUG5 572 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 SYT13Q7L8C5 426 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
RABEPK-201ENST00000259460 MICU3Q86XE3 530 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 ARID3BQ8IVW6 561 aaPredicted RBP16.03■□□□□ 0.16
RABEPK-201ENST00000259460 TCEAL8Q8IYN2 117 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 SLC7A3Q8WY07 619 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 LENG9Q96B70 501 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 TMEM74BQ9NUR3 256 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 CEP72Q9P209 647 aa16.03■□□□□ 0.16
RABEPK-201ENST00000259460 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms