RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TCP11X1B4DZS4 312 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 H0YCG3 227 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 RGS20O76081 388 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 OAS1P00973 400 aaKnown RBP16.2■□□□□ 0.18
DDX56-201ENST00000258772 FDX1P10109 184 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 DSG3P32926 999 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 TAS2R40P59535 323 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 CXCL9Q07325 125 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 FAM228AQ86W67 206 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 CCDC60Q8IWA6 550 aaPredicted RBP16.2■□□□□ 0.18
DDX56-201ENST00000258772 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 C11orf70Q9BRQ4 267 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 KCNK9Q9NPC2 374 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 ADAM22Q9P0K1 906 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 TPX2Q9ULW0 747 aaKnown RBP16.2■□□□□ 0.18
DDX56-201ENST00000258772 MGRN1O60291 552 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 VNN1O95497 513 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 PIK3CAP42336 1068 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 ACOT2P49753 483 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
DDX56-201ENST00000258772 SP4Q02446 784 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 MAMLD1Q13495 774 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 ABRAQ8N0Z2 381 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 CCDC89Q8N998 374 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
DDX56-201ENST00000258772 FAM118BQ9BPY3 351 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 OSBPL8Q9BZF1 889 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 GINM1Q9NU53 330 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 FGFR1OP2Q9NVK5 253 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 STYXL1Q9Y6J8 313 aa16.2■□□□□ 0.18
DDX56-201ENST00000258772 RDXP35241 583 aaKnown RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 NOMO3P69849 1222 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 ELF3P78545 371 aaPredicted RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 PRKCEQ02156 737 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 MPP2Q14168 576 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 PASD1Q8IV76 773 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 KATNAL2Q8IYT4 538 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 CYP4X1Q8N118 509 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 BBOF1Q8ND07 529 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 VCPIP1Q96JH7 1222 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 MRPL47Q9HD33 250 aaKnown RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 ABCF3Q9NUQ8 709 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 USP15Q9Y4E8 981 aaPredicted RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 PCDHB4Q9Y5E5 795 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 PTPRJQ12913 1337 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 BRAFP15056 766 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 ABCD1P33897 745 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 CUL2Q13617 745 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 PLEKHA7Q6IQ23 1121 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 HIBCHQ6NVY1 386 aaPredicted RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 CRELD2Q6UXH1 353 aaPredicted RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 ABHD15Q6UXT9 468 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 TRIM72Q6ZMU5 477 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 ANKRD42Q8N9B4 389 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 EXD1Q8NHP7 514 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 CKAP2Q8WWK9 683 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 APOBEC3GQ9HC16 384 aaKnown RBP16.19■□□□□ 0.18
DDX56-201ENST00000258772 MLXIPLQ9NP71 852 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 SLC9A2Q9UBY0 812 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 LGALS13Q9UHV8 139 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 PARP14Q460N5 1801 aa16.19■□□□□ 0.18
DDX56-201ENST00000258772 CETPP11597 493 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 GNA15P30679 374 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 GSCP56915 257 aaPredicted RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 ACTR2P61160 394 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 FAM133BQ5BKY9 247 aaKnown RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 IZUMO3Q5VZ72 239 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 NUGGCQ68CJ6 796 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 ANKS1BQ7Z6G8 1248 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 PHF13Q86YI8 300 aaPredicted RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 RELL1Q8IUW5 271 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 CCDC63Q8NA47 563 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 MAGEC3Q8TD91 643 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 NSUN6Q8TEA1 469 aaKnown RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 FAM212AQ96EL1 285 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 VPS33BQ9H267 617 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 KCNG1Q9UIX4 513 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 NAALADL1Q9UQQ1 740 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 COL11A1P12107 1806 aaPredicted RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 NFASCO94856 1347 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 CDH16O75309 829 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 SSTR3P32745 418 aaPredicted RBP16.18■□□□□ 0.18
DDX56-201ENST00000258772 STRN3Q13033 797 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 MTERF2Q49AM1 385 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 HAPLN2Q9GZV7 340 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 TBK1Q9UHD2 729 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 USTQ9Y2C2 406 aa16.18■□□□□ 0.18
DDX56-201ENST00000258772 ZNF541Q9H0D2 1346 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 GH1P01241 217 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 CD58P19256 250 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 KLRC2P26717 231 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms