RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 RAB21Q9UL25 225 aa24.3■■□□□ 1.48
CDX1-201ENST00000231656 NCANO14594 1321 aa24.3■■□□□ 1.48
CDX1-201ENST00000231656 FTCDO95954 541 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 MCF2P10911 925 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 CDK7P50613 346 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 IFI16Q16666 785 aaKnown RBP24.29■■□□□ 1.48
CDX1-201ENST00000231656 TRIM71Q2Q1W2 868 aaKnown RBP24.29■■□□□ 1.48
CDX1-201ENST00000231656 THNSL1Q8IYQ7 743 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 LRRC57Q8N9N7 239 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 RBAKQ9NYW8 714 aaPredicted RBP24.29■■□□□ 1.48
CDX1-201ENST00000231656 TULP1O00294 542 aaPredicted RBP24.29■■□□□ 1.48
CDX1-201ENST00000231656 ZRANB2O95218 330 aaKnown RBP eCLIP24.29■■□□□ 1.48
CDX1-201ENST00000231656 PALB2Q86YC2 1186 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 CEP120Q8N960 986 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 TPCN2Q8NHX9 752 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 FAM84AQ96KN4 292 aa24.29■■□□□ 1.48
CDX1-201ENST00000231656 CPSF3Q9UKF6 684 aaKnown RBP24.29■■□□□ 1.48
CDX1-201ENST00000231656 NOC2LQ9Y3T9 749 aaKnown RBP24.29■■□□□ 1.48
CDX1-201ENST00000231656 KIAA0100Q14667 2235 aaKnown RBP24.28■■□□□ 1.48
CDX1-201ENST00000231656 ZC3H11AO75152 810 aaKnown RBP eCLIP24.28■■□□□ 1.48
CDX1-201ENST00000231656 C4BPAP04003 597 aaKnown RBP24.28■■□□□ 1.48
CDX1-201ENST00000231656 RHOXF2BP0C7M4 288 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 TMEM253P0C7T8 217 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 MNX1P50219 401 aaPredicted RBP24.28■■□□□ 1.48
CDX1-201ENST00000231656 ZACNQ401N2 412 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 TMCO3Q6UWJ1 677 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 FAM228AQ86W67 206 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 RHOXF2Q9BQY4 288 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 ADPGKQ9BRR6 497 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 PDE11AQ9HCR9 933 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 NOCTQ9UK39 431 aaKnown RBP24.28■■□□□ 1.48
CDX1-201ENST00000231656 PTPRJQ12913 1337 aa24.28■■□□□ 1.48
CDX1-201ENST00000231656 AXLP30530 894 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 CXCR5P32302 372 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 NOP2P46087 812 aaKnown RBP24.27■■□□□ 1.48
CDX1-201ENST00000231656 ITIH3Q06033 890 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 BRD3Q15059 726 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 NOTUMQ6P988 496 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 BRSK2Q8IWQ3 736 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 EPS8L1Q8TE68 723 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 TATDN2Q93075 761 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 FNBP1Q96RU3 617 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 PSMB7Q99436 277 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 ARID3AQ99856 593 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 TAS2R14Q9NYV8 317 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 ANK1P16157 1881 aa24.27■■□□□ 1.48
CDX1-201ENST00000231656 CHRNB2P17787 502 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 OSTNP61366 133 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 CC2D1AQ6P1N0 951 aaPredicted RBP24.26■■□□□ 1.47
CDX1-201ENST00000231656 SLFN11Q7Z7L1 901 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 PIN4Q9Y237 131 aaKnown RBP24.26■■□□□ 1.47
CDX1-201ENST00000231656 CCDC151A5D8V7 595 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 TMCO5BA8MYB1 307 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 CYP26A1O43174 497 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 RPS6KA5O75582 802 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 USP8P40818 1118 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 GCNT1Q02742 428 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 FAM26DQ5JW98 314 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 TDRD10Q5VZ19 366 aaKnown RBP24.26■■□□□ 1.47
CDX1-201ENST00000231656 LMBRD2Q68DH5 695 aaPredicted RBP24.26■■□□□ 1.47
CDX1-201ENST00000231656 SLC27A1Q6PCB7 646 aa24.26■■□□□ 1.47
CDX1-201ENST00000231656 NOP9Q86U38 636 aaKnown RBP24.26■■□□□ 1.47
CDX1-201ENST00000231656 RPUSD2Q8IZ73 545 aaKnown RBP24.26■■□□□ 1.47
CDX1-201ENST00000231656 CAND2O75155 1236 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 STAG3L1P0CL83 205 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 TNNI1P19237 187 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 ZNF618Q5T7W0 954 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 ENOSF1Q7L5Y1 443 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 FAM126BQ8IXS8 530 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 TMEM192Q8IY95 271 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 RFFLQ8WZ73 363 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 CGRRF1Q99675 332 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 PI4K2AQ9BTU6 479 aa24.25■■□□□ 1.47
CDX1-201ENST00000231656 SEPT11Q9NVA2 429 aaKnown RBP24.25■■□□□ 1.47
CDX1-201ENST00000231656 HLA-DRAP01903 254 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 CKBP12277 381 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 GJA8P48165 433 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 C2orf54Q08AI8 447 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 DCAF4L1Q3SXM0 396 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 CTNNBL1Q8WYA6 563 aaPredicted RBP24.24■■□□□ 1.47
CDX1-201ENST00000231656 ELMO3Q96BJ8 720 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 ISCUQ9H1K1 167 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 FAM53CQ9NYF3 392 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 PACSIN2Q9UNF0 486 aaPredicted RBP24.24■■□□□ 1.47
CDX1-201ENST00000231656 ST3GAL5Q9UNP4 418 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 CITO14578 2027 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 MKI67P46013 3256 aaKnown RBP24.24■■□□□ 1.47
CDX1-201ENST00000231656 ANKRD62A6NC57 917 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 SEC31AO94979 1220 aaKnown RBP24.24■■□□□ 1.47
CDX1-201ENST00000231656 VNN1O95497 513 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 NPTXRO95502 500 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 TUBBP07437 444 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 CLTAP09496 248 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 FBXO47Q5MNV8 452 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 APBB1IPQ7Z5R6 666 aaPredicted RBP24.24■■□□□ 1.47
CDX1-201ENST00000231656 SLC47A2Q86VL8 602 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 MMGT1Q8N4V1 131 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 ARHGEF26Q96DR7 871 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 FAM81BQ96LP2 452 aa24.24■■□□□ 1.47
CDX1-201ENST00000231656 PCDHB18PQ96TA0 734 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms