RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 SOWAHDA6NJG2 315 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 EIF3CLB5ME19 914 aaKnown RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 ARVCFO00192 962 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 ABLIM1O14639 778 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 NPTXRO95502 500 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 C4BPAP04003 597 aaKnown RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 RAB27AP51159 221 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 OSTNP61366 133 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 ARID5AQ03989 594 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 TLE2Q04725 743 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 PAK2Q13177 524 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 BFSP2Q13515 415 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 TMEM132DQ14C87 1099 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 PTPN14Q15678 1187 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 C1orf53Q5VUE5 145 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 TWF2Q6IBS0 349 aaKnown RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 TMEM139Q8IV31 216 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 TTC39CQ8N584 583 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 ZSWIM2Q8NEG5 633 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 PLEKHO2Q8TD55 490 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 DHX38Q92620 1227 aaKnown RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 EIF3CQ99613 913 aaKnown RBP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.73□□□□□ -0.21
ZNF548-210ENST00000600442 HAPLN2Q9GZV7 340 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 PPP2R2CQ9Y2T4 447 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 FHOD1Q9Y613 1164 aa13.73□□□□□ -0.21
ZNF548-210ENST00000600442 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 F8VZ95 297 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 EPHB6O15197 1021 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 FAM189A1O60320 539 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 EDN1P05305 212 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-210ENST00000600442 ITGB8P26012 769 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 ATICP31939 592 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 USP8P40818 1118 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
ZNF548-210ENST00000600442 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-210ENST00000600442 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 C15orf39Q6ZRI6 1047 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 TAS1R2Q8TE23 839 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 SIX2Q9NPC8 291 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-210ENST00000600442 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
ZNF548-210ENST00000600442 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
ZNF548-210ENST00000600442 LACTBL1A8MY62 500 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-210ENST00000600442 KRT86O43790 486 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 KIF5CO60282 957 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 CD4P01730 458 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 CTSHP09668 335 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 CXCL8P10145 99 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 FOSL2P15408 326 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 HOXA11P31270 313 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-210ENST00000600442 EIF4A3P38919 411 aaKnown RBP13.71□□□□□ -0.21
ZNF548-210ENST00000600442 TNFSF9P41273 254 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 PRKCIP41743 596 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 EPHB4P54760 987 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 JAM2P57087 298 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 RBP5P82980 135 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 MYO1EQ12965 1108 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 HIC1Q14526 733 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 SEZ6Q53EL9 994 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 FAM26DQ5JW98 314 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.21
ZNF548-210ENST00000600442 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-210ENST00000600442 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 WDR59Q6PJI9 974 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 LMO3Q8TAP4 145 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 PPP1R13LQ8WUF5 828 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 PGBD4Q96DM1 585 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 CHP1Q99653 195 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 FAM124BQ9H5Z6 455 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-210ENST00000600442 CDHR5Q9HBB8 845 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 ADGRG1Q9Y653 693 aa13.71□□□□□ -0.21
ZNF548-210ENST00000600442 KAT6AQ92794 2004 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 PARNO95453 639 aaKnown RBP13.7□□□□□ -0.22
ZNF548-210ENST00000600442 KRT19P08727 400 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 KRT5P13647 590 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 FGFR4P22455 802 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 CLCN1P35523 988 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 KIF11P52732 1056 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 PTK2Q05397 1052 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF699Q32M78 642 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 PPP1R2P3Q6NXS1 205 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms