RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GOLGA2P5Q9HBQ8 144 aa27.94■■■□□ 2.06
TRIM28-204ENST00000594806 CACNG4Q9UBN1 327 aa27.94■■■□□ 2.06
TRIM28-204ENST00000594806 CSPG5O95196 566 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 PPP1R2P41236 205 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 GLUD2P49448 558 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 DSG1Q02413 1049 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 SPAG1Q07617 926 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 NFIL3Q16649 462 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 KIAA1841Q6NSI8 718 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 ZSWIM2Q8NEG5 633 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 RABGGTAQ92696 567 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 TUBGCP4Q9UGJ1 667 aa27.93■■■□□ 2.06
TRIM28-204ENST00000594806 F8W810 466 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 NFICP08651 508 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 HYAL1Q12794 435 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 PTPN14Q15678 1187 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 SNRNP35Q16560 246 aaKnown RBP27.92■■■□□ 2.06
TRIM28-204ENST00000594806 DUSP6Q16828 381 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 PDXDC1Q6P996 788 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 ADGRD2Q7Z7M1 963 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 NOC3LQ8WTT2 800 aaKnown RBP27.92■■■□□ 2.06
TRIM28-204ENST00000594806 PABPC5Q96DU9 382 aaKnown RBP27.92■■■□□ 2.06
TRIM28-204ENST00000594806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.92■■■□□ 2.06
TRIM28-204ENST00000594806 DMAC2Q9NW81 257 aa27.92■■■□□ 2.06
TRIM28-204ENST00000594806 EXOC3O60645 756 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 LILRB3O75022 631 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 CYP2J2P51589 502 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 CREMQ03060 361 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 KIAA0319Q5VV43 1072 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.91■■■□□ 2.06
TRIM28-204ENST00000594806 CBWD2Q8IUF1 395 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 EFHBQ8N7U6 833 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 HLA-CQ95604 372 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 EMILIN2Q9BXX0 1053 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 NUB1Q9Y5A7 615 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 PCDHGC5Q9Y5F6 944 aa27.91■■■□□ 2.06
TRIM28-204ENST00000594806 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.9■■■□□ 2.06
TRIM28-204ENST00000594806 HIDE1A8MVS5 230 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 RPL13P26373 211 aaKnown RBP27.9■■■□□ 2.06
TRIM28-204ENST00000594806 NRIP1P48552 1158 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 STIM1Q13586 685 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 CTC1Q2NKJ3 1217 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 CD300LGQ6UXG3 332 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 TAS1R1Q7RTX1 841 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 PPFIBP1Q86W92 1011 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 HASPINQ8TF76 798 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 ERCC4Q92889 916 aaPredicted RBP27.9■■■□□ 2.06
TRIM28-204ENST00000594806 TTPALQ9BTX7 342 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 MAN1B1Q9UKM7 699 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 MAPK8IP1Q9UQF2 711 aa27.9■■■□□ 2.06
TRIM28-204ENST00000594806 BRWD1Q9NSI6 2320 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.89■■■□□ 2.06
TRIM28-204ENST00000594806 NR3C1P04150 777 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 CA8P35219 290 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 EDRF1Q3B7T1 1238 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 FAM171A1Q5VUB5 890 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 EFCAB13Q8IY85 973 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 TRIML1Q8N9V2 468 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 C3orf58Q8NDZ4 430 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 RXFP1Q9HBX9 757 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 DPP3Q9NY33 737 aa27.89■■■□□ 2.06
TRIM28-204ENST00000594806 ANO9A1A5B4 782 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 SYN3O14994 580 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 C1RP00736 705 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 SRGAP2BP0DMP2 458 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 PRCPP42785 496 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 ADAM15Q13444 863 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 PSMD6Q15008 389 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 RBM23Q86U06 439 aaKnown RBP27.88■■■□□ 2.05
TRIM28-204ENST00000594806 MFSD14AQ96MC6 490 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 IGFLR1Q9H665 355 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 PDE11AQ9HCR9 933 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 KIAA1468Q9P260 1216 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 FNIP2Q9P278 1114 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 THEGQ9P2T0 379 aa27.88■■■□□ 2.05
TRIM28-204ENST00000594806 PIRO00625 290 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 MAPK13O15264 365 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 FGFR3P22607 806 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 TFAMQ00059 246 aaKnown RBP27.87■■■□□ 2.05
TRIM28-204ENST00000594806 CYP24A1Q07973 514 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 AAK1Q2M2I8 961 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 C9orf57Q5W0N0 161 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 TMEM184AQ6ZMB5 413 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 WDR49Q8IV35 697 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 SMYD4Q8IYR2 804 aaPredicted RBP27.87■■■□□ 2.05
TRIM28-204ENST00000594806 RDH13Q8NBN7 331 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 AUTS2Q8WXX7 1259 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 PIK3R5Q8WYR1 880 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 SUSD3Q96L08 255 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 FNBP1Q96RU3 617 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 CLSTN2Q9H4D0 955 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 UBE2ZQ9H832 354 aaPredicted RBP27.87■■■□□ 2.05
TRIM28-204ENST00000594806 FRMD4BQ9Y2L6 1034 aa27.87■■■□□ 2.05
TRIM28-204ENST00000594806 ARHGEF37A1IGU5 675 aa27.86■■■□□ 2.05
TRIM28-204ENST00000594806 PER2O15055 1255 aa27.86■■■□□ 2.05
TRIM28-204ENST00000594806 MCM4P33991 863 aa27.86■■■□□ 2.05
TRIM28-204ENST00000594806 AARSP49588 968 aaKnown RBP eCLIP27.86■■■□□ 2.05
TRIM28-204ENST00000594806 MORC3Q14149 939 aa27.86■■■□□ 2.05
TRIM28-204ENST00000594806 ZCWPW2Q504Y3 356 aa27.86■■■□□ 2.05
TRIM28-204ENST00000594806 CENPPQ6IPU0 288 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms