RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 TCF12Q99081 682 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CDCA3Q99618 268 aaPredicted RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 SDF4Q9BRK5 362 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 PHF7Q9BWX1 381 aaPredicted RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 SPZ1Q9BXG8 430 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 BCAS3Q9H6U6 928 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 PADI3Q9ULW8 664 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 TRPV2Q9Y5S1 764 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 LAMA4Q16363 1823 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 FRMPD4Q14CM0 1322 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 hCG_2014768A0A024R1R8 64 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 CCDC194A0A1B0GVG4 234 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 SMIM35A0A1B0GVV1 85 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 GSTTP1A0A1W2PQM5 241 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 DENND3A2RUS2 1198 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 MBLAC1A4D2B0 266 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 LOC730098B7Z3J9 87 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 E7EWF7 191 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 MEIS2O14770 477 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 GPR182O15218 404 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 LINC01565O15544 149 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 CYTH3O43739 400 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 TBX10O75333 385 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 DDAH1O94760 285 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 CSPG5O95196 566 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 ITGB1P05556 798 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 CYP21A2P08686 494 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 INSRRP14616 1297 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 SLC26A2P50443 739 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 STAT5BP51692 787 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 ZXDAP98168 799 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 KRT17Q04695 432 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 MGAT3Q09327 533 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 PAN2Q504Q3 1202 aaKnown RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 RUFY4Q6ZNE9 571 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 SYDE1Q6ZW31 735 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 PLPPR4Q7Z2D5 763 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 RBM23Q86U06 439 aaKnown RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 SMRP1Q8NCR6 262 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 MSLNLQ96KJ4 702 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 OSBPL7Q9BZF2 842 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 FAM49AQ9H0Q0 323 aaPredicted RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 SLC9A2Q9UBY0 812 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 PCDHA2Q9Y5H9 948 aa6.32□□□□□ -1.4
DNMT1-220ENST00000589351 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
DNMT1-220ENST00000589351 IGSF9BQ9UPX0 1349 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 A0A1W2PP55 124 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 HBP1O60381 514 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 ATP9AO75110 1047 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 RPS6KA5O75582 802 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 B3GALT4O96024 378 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 FOSP01100 380 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 KCNA2P16389 499 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 HOXB8P17481 243 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 IBSPP21815 317 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 MCM5P33992 734 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 ZNF76P36508 570 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 SETQ01105 290 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 SIGLEC14Q08ET2 396 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 TMEM62Q0P6H9 643 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 CAMK1Q14012 370 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 CBX2Q14781 532 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 MARCH8Q5T0T0 291 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 FYB2Q5VWT5 728 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 FAM160B1Q5W0V3 765 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 CES5AQ6NT32 575 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 SLC24A5Q71RS6 500 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 RTN4RL1Q86UN2 441 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 THNSL1Q8IYQ7 743 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 IGDCC4Q8TDY8 1250 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 ATOH1Q92858 354 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 PMM1Q92871 262 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 TMEM87BQ96K49 555 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 MXRA8Q9BRK3 442 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 GLT8D2Q9H1C3 349 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 LIN7BQ9HAP6 207 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 ATP6V0A4Q9HBG4 840 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 TLR9Q9NR96 1032 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 TCEAL9Q9UHQ7 104 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 PCDHA6Q9UN73 950 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 FAN1Q9Y2M0 1017 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 NR2E1Q9Y466 385 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 USP15Q9Y4E8 981 aaPredicted RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
DNMT1-220ENST00000589351 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
DNMT1-220ENST00000589351 UBIAD1Q9Y5Z9 338 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms