RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
IFT20-206ENST00000578122 TLR9Q9NR96 1032 aa16.7■□□□□ 0.26
IFT20-206ENST00000578122 DMAC2Q9NW81 257 aa16.7■□□□□ 0.26
IFT20-206ENST00000578122 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.7■□□□□ 0.26
IFT20-206ENST00000578122 TUBGCP4Q9UGJ1 667 aa16.7■□□□□ 0.26
IFT20-206ENST00000578122 KIF4AO95239 1232 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 MBD3O95983 291 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 BMP6P22004 513 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 CLCNKBP51801 687 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 GUCY2FP51841 1108 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 WNT7BP56706 349 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 ERVFC1P60507 584 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 STIM1Q13586 685 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 MYBPC2Q14324 1141 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
IFT20-206ENST00000578122 UPP1Q16831 310 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 TIGD5Q53EQ6 642 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 PDE12Q6L8Q7 609 aaKnown RBP16.69■□□□□ 0.26
IFT20-206ENST00000578122 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 TRIML1Q8N9V2 468 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 BEST2Q8NFU1 509 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 TMEM174Q8WUU8 243 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 VN1R3Q9BXE9 311 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 ENTPD7Q9NQZ7 604 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 STK39Q9UEW8 545 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 ADAM28Q9UKQ2 775 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
IFT20-206ENST00000578122 TMEM189-UBE2V1I3L0A0 370 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 PODXLO00592 558 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 FSCN2O14926 492 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 B3GAT3O94766 335 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 IRS1P35568 1242 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 PPP1R2P41236 205 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 BMS1Q14692 1282 aaKnown RBP16.68■□□□□ 0.26
IFT20-206ENST00000578122 SURF1Q15526 300 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 NFIL3Q16649 462 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 ZCWPW2Q504Y3 356 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 CENPPQ6IPU0 288 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 NT5DC4Q86YG4 428 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 EFCAB13Q8IY85 973 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 HASPINQ8TF76 798 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
IFT20-206ENST00000578122 TSG101Q99816 390 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 TCF25Q9BQ70 676 aa16.68■□□□□ 0.26
IFT20-206ENST00000578122 NSUN3Q9H649 340 aaKnown RBP16.68■□□□□ 0.26
IFT20-206ENST00000578122 PSMA7O14818 248 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 IGFBP6P24592 240 aaPredicted RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 RPL13P26373 211 aaKnown RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 LRPAP1P30533 357 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 PSMD6Q15008 389 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 CCDC85BQ15834 202 aaPredicted RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 CD300LGQ6UXG3 332 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 TMC7Q7Z402 723 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 TMEM130Q8N3G9 435 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 MAFAQ8NHW3 353 aaPredicted RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 CACTINQ8WUQ7 758 aaKnown RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 MFSD14AQ96MC6 490 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 HERC2P3Q9BVR0 1158 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 GPR62Q9BZJ7 368 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 ZBP1Q9H171 429 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 NGRNQ9NPE2 291 aaKnown RBP16.67■□□□□ 0.26
IFT20-206ENST00000578122 FRMD4BQ9Y2L6 1034 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 PCDHGC5Q9Y5F6 944 aa16.67■□□□□ 0.26
IFT20-206ENST00000578122 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.266e-6■■■■■ 103.4
IFT20-206ENST00000578122 PPP1R3GB7ZBB8 358 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 CXCL14O95715 111 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 EFEMP2O95967 443 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 SOD2P04179 222 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 CTSAP10619 480 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 NR2F2P24468 414 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 SCN1AP35498 2009 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 CASP4P49662 377 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 ADAM9Q13443 819 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
IFT20-206ENST00000578122 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 TCEAL5Q5H9L2 206 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 KLHL10Q6JEL2 608 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 TAS1R1Q7RTX1 841 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 C3orf58Q8NDZ4 430 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 CCDC127Q96BQ5 260 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 DPP3Q9NY33 737 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 VWA8A3KMH1 1905 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
IFT20-206ENST00000578122 LAMA2P24043 3122 aaKnown RBP16.65■□□□□ 0.26
IFT20-206ENST00000578122 CCNE1P24864 410 aa16.65■□□□□ 0.26
IFT20-206ENST00000578122 CA8P35219 290 aa16.65■□□□□ 0.26
IFT20-206ENST00000578122 BRCC3P46736 316 aa16.65■□□□□ 0.26
IFT20-206ENST00000578122 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
IFT20-206ENST00000578122 FAM171A1Q5VUB5 890 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms