RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 FAM13AO94988 1023 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 MYBP10242 640 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 AKAP5P24588 427 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 HOXD13P35453 343 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 AFMP43652 599 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 PRPF4BQ13523 1007 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 SNW1Q13573 536 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 PPP2R5AQ15172 486 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 MAPK6Q16659 721 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 SEZ6Q53EL9 994 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 NOTUMQ6P988 496 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 HAUS6Q7Z4H7 955 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 IQUBQ8NA54 791 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 GSTCDQ8NEC7 633 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 GDPD5Q8WTR4 605 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 ARNTL2Q8WYA1 636 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 MRPS27Q92552 414 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 PAGE5Q96GU1 130 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 ACO2Q99798 780 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 APOL6Q9BWW8 343 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 CDT1Q9H211 546 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 TNMDQ9H2S6 317 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 C17orf75Q9HAS0 396 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 PARVGQ9HBI0 331 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 TYW1Q9NV66 732 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 FAM13BQ9NYF5 915 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 LRFN2Q9ULH4 789 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 PLAGL2Q9UPG8 496 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 HCN4Q9Y3Q4 1203 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 C5orf42Q9H799 3197 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 K7ENM7 598 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 KLRC4O43908 158 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 SLFN14P0C7P3 912 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 STAG3L1P0CL83 205 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 IDEP14735 1019 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 PROZP22891 400 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 IGFBP6P24592 240 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 EFNA5P52803 228 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ERVK-21P61565 698 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 GTF2BQ00403 316 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 EHHADHQ08426 723 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 COASYQ13057 564 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 BTG3Q14201 252 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 EPC2Q52LR7 807 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ZBTB41Q5SVQ8 909 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ATF7IP2Q5U623 682 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 SLC27A1Q6PCB7 646 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ZNF720Q7Z2F6 126 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 TMEM173Q86WV6 379 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ZNF280BQ86YH2 543 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 CMTR2Q8IYT2 770 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 FMR1NBQ8N0W7 255 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 BCL7CQ8WUZ0 217 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 KCNN1Q92952 543 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 C7orf25Q9BPX7 421 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 TIMMDC1Q9NPL8 285 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 SNTG2Q9NY99 539 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 DACT1Q9NYF0 836 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 KLK14Q9P0G3 267 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 LARSQ9P2J5 1176 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 CACNG4Q9UBN1 327 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 DNAJB4Q9UDY4 337 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 SEPT3Q9UH03 358 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 TBX20Q9UMR3 447 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ZMYM2Q9UBW7 1377 aa10.38□□□□□ -0.75
NPLOC4-219ENST00000576713 ARL5CA6NH57 179 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 F8W810 466 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 PTGESO14684 152 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 FAM189A1O60320 539 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 DDHD2O94830 711 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 EOMESO95936 686 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 DNAJB1P25685 340 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 AXLP30530 894 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 MLH1P40692 756 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 SYKP43405 635 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 PCBP1Q15365 356 aaKnown RBP eCLIP10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 MAP4K3Q8IVH8 894 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 ALDH16A1Q8IZ83 802 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 FIBCD1Q8N539 461 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 ERCC4Q92889 916 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 CCDC51Q96ER9 411 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 GAD1Q99259 594 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 TMEM117Q9H0C3 514 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 CUEDC2Q9H467 287 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.751e-8■■■■■ 101
NPLOC4-219ENST00000576713 PANK4Q9NVE7 773 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 TBC1D13Q9NVG8 400 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 TNFSF13BQ9Y275 285 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 INPP5FQ9Y2H2 1132 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 MUC3AQ02505 3323 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 ATG2AQ2TAZ0 1938 aa10.37□□□□□ -0.75
NPLOC4-219ENST00000576713 NLRC5Q86WI3 1866 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms