RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 TDGQ13569 410 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 SPECC1Q5M775 1068 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 LILRA6Q6PI73 481 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 ANKS3Q6ZW76 656 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 HAUS6Q7Z4H7 955 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 RAD54LQ92698 747 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 C18orf25Q96B23 403 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 ZMAT2Q96NC0 199 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 PRRX2Q99811 253 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 NTPCRQ9BSD7 190 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 KCNK12Q9HB15 430 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 PARVGQ9HBI0 331 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 LMBRD1Q9NUN5 540 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 CNTN3Q9P232 1028 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 MTRRQ9UBK8 725 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 CLIC4Q9Y696 253 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 TSC2P49815 1807 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 NOTCH4Q99466 2003 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 ABLIM1O14639 778 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 ADAM12O43184 909 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 N4BP1O75113 896 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 KCNE1P15382 129 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 FSHRP23945 695 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 PTPN5P54829 565 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 ARPP19P56211 112 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 MCL1Q07820 350 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 XKR4Q5GH76 650 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 IER5LQ5T953 404 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 ALKAL1Q6UXT8 129 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 MYADMQ96S97 322 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 BLOC1S4Q9NUP1 217 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 TUBGCP4Q9UGJ1 667 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 DUSP12Q9UNI6 340 aa10.53□□□□□ -0.72
NPLOC4-216ENST00000574344 SCN1AP35498 2009 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 H7C4K7 107 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 STK25O00506 426 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 XPOTO43592 962 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 LRG1P02750 347 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 CLTAP09496 248 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 HNRNPA1P09651 372 aaKnown RBP eCLIP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 AVPR2P30518 371 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 ELF1P32519 619 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 RPL9P32969 192 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 SPAG1Q07617 926 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 RESTQ13127 1097 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 RAB33AQ14088 237 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 SLC10A6Q3KNW5 377 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 ZNF280DQ6N043 979 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 FAM173BQ6P4H8 233 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 DYMQ7RTS9 669 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 ALYREFQ86V81 257 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 LRRC15Q8TF66 581 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 RSAD2Q8WXG1 361 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 MSTO1Q9BUK6 570 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 CCSER1Q9C0I3 900 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 RPF1Q9H9Y2 349 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 EPS15L1Q9UBC2 864 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 TBX20Q9UMR3 447 aa10.52□□□□□ -0.73
NPLOC4-216ENST00000574344 PRRG1O14668 218 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 SYN3O14994 580 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 OGTO15294 1046 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 NARSO43776 548 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 CFHP08603 1231 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 CPB1P15086 417 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 SCP2P22307 547 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 NMT1P30419 496 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 HOXA9P31269 272 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 ABCD1P33897 745 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 TNFSF9P41273 254 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 ZNF131P52739 623 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 UBE2HP62256 183 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 NTHL1P78549 312 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 ROR1Q01973 937 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 PTPAQ15257 358 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 KYAT1Q16773 422 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
NPLOC4-216ENST00000574344 RRAGBQ5VZM2 374 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms