RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 HIDE1A8MVS5 230 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 EXTL3O43909 919 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 KINO60870 393 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 PRPF40AO75400 957 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 LDHAP00338 332 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 NFICP08651 508 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 TMEM184AQ6ZMB5 413 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 TMC7Q7Z402 723 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 CD302Q8IX05 232 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 TMEM130Q8N3G9 435 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 VN1R2Q8NFZ6 395 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 HASPINQ8TF76 798 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 ERCC4Q92889 916 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 FBXL18Q96ME1 805 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 TSPAN18Q96SJ8 248 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 FAM213AQ9BRX8 229 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 GPR62Q9BZJ7 368 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 KCTD10Q9H3F6 313 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 ASB7Q9H672 318 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 EPHX3Q9H6B9 360 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 HSPBP1Q9NZL4 362 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 UBQLN1Q9UMX0 589 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
RABGGTA-219ENST00000560871 GOLGA8IPA6NC78 632 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 PODXLO00592 558 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 CYP3A5P20815 502 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 LRPAP1P30533 357 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 RBM10P98175 930 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 ZP2Q05996 745 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 PTPN14Q15678 1187 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 JADE1Q6IE81 842 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 HS2ST1Q7LGA3 356 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 TAS1R1Q7RTX1 841 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 ADHFE1Q8IWW8 467 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 EFCAB13Q8IY85 973 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 MRPL43Q8N983 215 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 GSDMAQ96QA5 445 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 CHST7Q9NS84 486 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 RMND1Q9NWS8 449 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 BARX2Q9UMQ3 279 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 DERAQ9Y315 318 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 C2CD2Q9Y426 696 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 PCDHA5Q9Y5H7 936 aa16.83■□□□□ 0.28
RABGGTA-219ENST00000560871 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 PI4K2BG5E9Z4 385 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 CLIC2O15247 247 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 LILRB3O75022 631 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 IL18RAPO95256 599 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 SPATA1Q5VX52 437 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 CBWD2Q8IUF1 395 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 GUF1Q8N442 669 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 SMRP1Q8NCR6 262 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 AUTS2Q8WXX7 1259 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 DDX27Q96GQ7 796 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 LMBRD1Q9NUN5 540 aa16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 HOOK1Q9UJC3 728 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-219ENST00000560871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 PDXKO00764 312 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 XPOTO43592 962 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 TADA2AO75478 443 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 B3GAT3O94766 335 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 CXCL14O95715 111 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 SSTR3P32745 418 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 RPL9P32969 192 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 GLUD2P49448 558 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 DSG1Q02413 1049 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 TMEM132DQ14C87 1099 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 COBLL1Q53SF7 1204 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 ZNF658Q5TYW1 1059 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 SMARCE1Q969G3 411 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 C1QTNF1Q9BXJ1 281 aa16.81■□□□□ 0.28
RABGGTA-219ENST00000560871 MUC3AQ02505 3323 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 KIF20AO95235 890 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 SMC2O95347 1197 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 URODP06132 367 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 BMS1Q14692 1282 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 ZCWPW2Q504Y3 356 aa16.8■□□□□ 0.28
RABGGTA-219ENST00000560871 RTP2Q5QGT7 225 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms