RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TTC13Q8NBP0 860 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 HSPH1Q92598 858 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ZC3H12CQ9C0D7 883 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 HSPBP1Q9NZL4 362 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 KLHL3Q9UH77 587 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 GINS2Q9Y248 185 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PFDN6O15212 129 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TFAMQ00059 246 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PKN2Q16513 984 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TTC39BQ5VTQ0 682 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 AK8Q96MA6 479 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 OSBPL10Q9BXB5 764 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 WWP1Q9H0M0 922 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 RPAP3Q9H6T3 665 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 USP11P51784 963 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 GEMIN4P57678 1058 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF268Q14587 947 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CCNJLQ8IV13 435 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TBCKQ8TEA7 893 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PARD3BQ8TEW8 1205 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 LENG1Q96BZ8 264 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FOXP3Q9BZS1 431 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TRPC7Q9HCX4 862 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CASP5P51878 434 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 IL31Q6EBC2 164 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 SH3BP5LQ7L8J4 393 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 MMP19Q99542 508 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 SENP7Q9BQF6 1050 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FAM129AQ9BZQ8 928 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 KIAA1683Q9H0B3 1180 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 RBM47A0AV96 593 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 C6orf222P0C671 652 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 AGKQ53H12 422 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CYB5R4Q7L1T6 521 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FRMD5Q7Z6J6 570 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 RIBC1Q8N443 379 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 GOLPH3Q9H4A6 298 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 VTA1Q9NP79 307 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 THAP1Q9NVV9 213 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 MMP1P03956 469 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 RAD54LQ92698 747 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ABHD8Q96I13 439 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 OSBPL8Q9BZF1 889 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CDY2AQ9Y6F7 541 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CDY1Q9Y6F8 540 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 SH2B2O14492 632 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 NBNO60934 754 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ATP6V1B2P21281 511 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 USP10Q14694 798 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF423Q2M1K9 1284 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 HDDC2Q7Z4H3 204 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 EXOC3L1Q86VI1 746 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 LCORLQ8N3X6 602 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 OR6P1Q8NGX9 317 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 UBASH3BQ8TF42 649 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ARHGEF38Q9NXL2 777 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 KIF28PB7ZC32 967 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 NR2F2P24468 414 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FAAP100Q0VG06 881 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TUBA3CQ13748 450 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 KLHL38Q2WGJ6 581 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TTMPQ5BVD1 217 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ARHGAP17Q68EM7 881 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 INTS2Q9H0H0 1204 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 EML4Q9HC35 981 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 SOX13Q9UN79 622 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 MYMKA6NI61 221 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PLIN5Q00G26 463 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TTLL12Q14166 644 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 AASDHQ4L235 1098 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 SLFN12LQ6IEE8 588 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FAM228AQ86W67 206 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 HDHD2Q9H0R4 259 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CPSF3Q9UKF6 684 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 RABL2BQ9UNT1 228 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PIPSLA2A3N6 862 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FCER1AP12319 257 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CDH3P22223 829 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 QPCTQ16769 361 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TXNRD1Q16881 649 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ARMCX1Q9P291 453 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 FKBP6O75344 327 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CD44P16070 742 aaKnown RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 HK2P52789 917 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ZIK1Q3SY52 487 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PRR23CQ6ZRP0 262 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 CCDC117Q8IWD4 279 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 RMDN1Q96DB5 314 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ASNSD1Q9NWL6 643 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 MAP3K13O43283 966 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PLCL1Q15111 1095 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 EPHA10Q5JZY3 1008 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 OTUD3Q5T2D3 398 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-248ENST00000558190 ACAD10Q6JQN1 1059 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 TERB1Q8NA31 727 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 PACSIN1Q9BY11 444 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 APPL1Q9UKG1 709 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 LRRN2O75325 713 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 P4HA1P13674 534 aa3.87□□□□□ -1.79
ATXN3-248ENST00000558190 EIF2AK2P19525 551 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 529.1 ms