RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 RXFP1Q9HBX9 757 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 CHST7Q9NS84 486 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 ADAM28Q9UKQ2 775 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 PCDHA12Q9UN75 941 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 CHD8Q9HCK8 2581 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 CNTNAP2Q9UHC6 1331 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 NOTCH4Q99466 2003 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 PP2D1A8MPX8 630 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 MEFVO15553 781 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SP9P0CG40 484 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 HARSP12081 509 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 GJA1P17302 382 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 FSHRP23945 695 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 TKTP29401 623 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 CDC25AP30304 524 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 OR1D2P34982 312 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 ID4P47928 161 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 CDC42EP1Q00587 391 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SPAG1Q07617 926 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 GIT2Q14161 759 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 HSP90AA2PQ14568 343 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 UBXN2BQ14CS0 331 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 NAB2Q15742 525 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 PSMD5Q16401 504 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 LPAL2Q16609 132 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SLC5A9Q2M3M2 681 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 USP41Q3LFD5 358 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SLC27A1Q6PCB7 646 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 DCLRE1AQ6PJP8 1040 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 CPLX2Q6PUV4 134 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 CD300LGQ6UXG3 332 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 C15orf39Q6ZRI6 1047 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 CATSPER3Q86XQ3 398 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 NSUN7Q8NE18 718 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 LNX1Q8TBB1 728 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SLC7A14Q8TBB6 771 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 FGF13Q92913 245 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 TCEAL4Q96EI5 215 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 CCDC43Q96MW1 224 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 MTMR9Q96QG7 549 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 JPH2Q9BR39 696 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 C1QTNF2Q9BXJ5 285 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 C22orf23Q9BZE7 217 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 PRKD2Q9BZL6 878 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 ARHGEF3Q9NR81 526 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 DLGAP2Q9P1A6 1054 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 KANSL3Q9P2N6 904 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 EPS15L1Q9UBC2 864 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 DNMT3BQ9UBC3 853 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 SIT1Q9Y3P8 196 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 VWA8A3KMH1 1905 aa7.56□□□□□ -1.2
PRPF40B-214ENST00000551320 TPRP12270 2363 aaKnown RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 A0A1B0GUA9 196 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 ASAP2O43150 1006 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 NEMFO60524 1076 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 BAG4O95429 457 aaKnown RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 PRKCBP05771 671 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 C8AP07357 584 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 SRFP11831 508 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 GCFC2P16383 781 aaKnown RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 CEBPBP17676 345 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 CLCNKBP51801 687 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 RAD51AP2Q09MP3 1159 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 TFDP1Q14186 410 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 GRM2Q14416 872 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 MXD4Q14582 209 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 PPM1LQ5SGD2 360 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 AXDND1Q5T1B0 1012 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 GALNT17Q6IS24 598 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 CMASQ8NFW8 434 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 TTC8Q8TAM2 541 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 C18orf25Q96B23 403 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 ZBTB45Q96K62 511 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 PLIN2Q99541 437 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 TM6SF1Q9BZW5 370 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 IGSF9Q9P2J2 1179 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 WNT16Q9UBV4 365 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 GIT1Q9Y2X7 761 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 SDK1Q7Z5N4 2213 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
PRPF40B-214ENST00000551320 NCANO14594 1321 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 MYH15Q9Y2K3 1946 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 SHISA7A6NL88 538 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 FAM170BA6NMN3 283 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 ANHXE9PGG2 379 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 DGAT1O75907 488 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 SEC24AO95486 1093 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 CCR2P41597 374 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 GUCY2FP51841 1108 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 NEK4P51957 841 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 CSTF1Q05048 431 aaKnown RBP7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 GRIK3Q13003 919 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 TUSC3Q13454 348 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 PRPF4BQ13523 1007 aaKnown RBP7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 ZRSR1Q15695 479 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms