RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RPTORQ8N122 1335 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 GH1P01241 217 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 PGK2P07205 417 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 TAS2R40P59535 323 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 DHX34Q14147 1143 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 TMEM132BQ14DG7 1078 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 TDRD10Q5VZ19 366 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 LRIG3Q6UXM1 1119 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 AGTPBP1Q9UPW5 1226 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 TCP11X1B4DZS4 312 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 NEFHP12036 1026 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 FKBP1AP62942 108 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 TRPC3Q13507 836 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 DALRD3Q5D0E6 543 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 ANKMY2Q8IV38 441 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 CCDC33Q8N5R6 958 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 ZNF280CQ8ND82 737 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 C1orf131Q8NDD1 294 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 ASAP3Q8TDY4 903 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 MCEEQ96PE7 176 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 MTMR12Q9C0I1 747 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 ZDHHC18Q9NUE0 388 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 SLC26A4O43511 780 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 KRT1P04264 644 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 KRT15P19012 456 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 BACE1P56817 501 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 GNPTABQ3T906 1256 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 SLC9A9Q8IVB4 645 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 MAP4K3Q8IVH8 894 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 KIF2BQ8N4N8 673 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 RBBP8NLQ8NC74 664 aaPredicted RBP14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 ALG13Q9NP73 1137 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 ZNF302Q9NR11 478 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 SLC12A6Q9UHW9 1150 aa14.55□□□□□ -0.08
PRPF40B-209ENST00000548825 FAM187AA6NFU0 413 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 EIF4E1BA6NMX2 242 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 F5H423 210 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 PODXLO00592 558 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 RIPK2O43353 540 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 GTF2H1P32780 548 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 DSG3P32926 999 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 RAP1GAPP47736 663 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 PEX5P50542 639 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 POU5F1Q01860 360 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 MKRN3Q13064 507 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 LIN9Q5TKA1 542 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 VSIG10LQ86VR7 867 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 LPAR1Q92633 364 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 KLF6Q99612 283 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 TMEM120BA0PK00 339 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 GOLGA8RI6L899 631 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 SGK1O00141 431 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 NOP56O00567 594 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 SFNP31947 248 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 NOP14P78316 857 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 C4orf33Q8N1A6 199 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 ANKS4BQ8N8V4 417 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 CEP120Q8N960 986 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 HVCN1Q96D96 273 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 SYT11Q9BT88 431 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 SAYSD1Q9NPB0 183 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 GGA3Q9NZ52 723 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 KAT6AQ92794 2004 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 UBE4BO95155 1302 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 PPFIA2O75334 1257 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 DGAT1O75907 488 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 BRAFP15056 766 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 STX2P32856 288 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 PTGIRP43119 386 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 ADCY2Q08462 1091 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 LY6KQ17RY6 165 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 P3H1Q32P28 736 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 RHPN2Q8IUC4 686 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 CD302Q8IX05 232 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 MCOLN2Q8IZK6 566 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 RNF149Q8NC42 400 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 CCDC197Q8NCU1 140 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 KIAA1683Q9H0B3 1180 aa14.54□□□□□ -0.08
PRPF40B-209ENST00000548825 F8VP50 259 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 DNM1LO00429 736 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 CES2O00748 559 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 GRAP2O75791 330 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 RGS20O76081 388 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 CST3P01034 146 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 MAPTP10636 758 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 ANXA13P27216 316 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 NRLP54845 237 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 ALCAMQ13740 583 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 NCOA4Q13772 614 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 CDO1Q16878 200 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 CLEC16AQ2KHT3 1053 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 IZUMO3Q5VZ72 239 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 MIS18BP1Q6P0N0 1132 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 FAM83AQ86UY5 434 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 EMC1Q8N766 993 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 GLIS1Q8NBF1 620 aa14.53□□□□□ -0.08
PRPF40B-209ENST00000548825 OSBPL7Q9BZF2 842 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms