RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 KIAA0319LQ8IZA0 1049 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 TMEM161BQ8NDZ6 487 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 MYRIPQ8NFW9 859 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 CAPZA3Q96KX2 299 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 UROC1Q96N76 676 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 TSPYL2Q9H2G4 693 aaPredicted RBP8.3□□□□□ -1.08
LRP6-206ENST00000543091 GOLGA6AQ9NYA3 693 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 IKBKGQ9Y6K9 419 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 CNTNAP2Q9UHC6 1331 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 ADCY6O43306 1168 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 LGR5O75473 907 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 CLTBP09497 229 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 SDC4P31431 198 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 RPL10AP62906 217 aaKnown RBP8.3□□□□□ -1.08
LRP6-206ENST00000543091 IFFO1Q0D2I5 559 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 NPY5RQ15761 445 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 PPP2R5EQ16537 467 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 SKIDA1Q1XH10 827 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 CTXN3Q4LDR2 81 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 CC2D1AQ6P1N0 951 aaPredicted RBP8.3□□□□□ -1.08
LRP6-206ENST00000543091 YAF2Q8IY57 180 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 PDLIM2Q96JY6 352 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 GAD1Q99259 594 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 SEPT5Q99719 369 aaPredicted RBP8.3□□□□□ -1.08
LRP6-206ENST00000543091 NGRNQ9NPE2 291 aaKnown RBP8.3□□□□□ -1.08
LRP6-206ENST00000543091 INTS13Q9NVM9 706 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 WDR35Q9P2L0 1181 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 MAGED2Q9UNF1 606 aaPredicted RBP8.3□□□□□ -1.08
LRP6-206ENST00000543091 GIT1Q9Y2X7 761 aa8.3□□□□□ -1.08
LRP6-206ENST00000543091 LRRC53A6NM62 1247 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 EDNRBP24530 442 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 AKAP5P24588 427 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 ACADSBP45954 432 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 PSRC1Q6PGN9 363 aaPredicted RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 RUFY4Q6ZNE9 571 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 OTUD6BQ8N6M0 293 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 STKLD1Q8NE28 680 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 NHEJ1Q9H9Q4 299 aaPredicted RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 GTF2IRD1Q9UHL9 959 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 C2CD2LO14523 706 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 APOEP02649 317 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 MYBL1P10243 752 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 PSMC1P62191 440 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 NOMO2Q5JPE7 1267 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 LRRC31Q6UY01 552 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 SYT10Q6XYQ8 523 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 TSHZ1Q6ZSZ6 1077 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 SLC24A5Q71RS6 500 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 LRRC8AQ8IWT6 810 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 PAWRQ96IZ0 340 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 MMTAG2Q9BU76 263 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 EMILIN2Q9BXX0 1053 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CNOT8Q9UFF9 292 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 MTRF1LQ9UGC7 380 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 COMMD10Q9Y6G5 202 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CNMDO75829 334 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 ARIH2O95376 493 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 ATP2A2P16615 1042 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 TTI2Q6NXR4 508 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 C1orf228Q6PIY5 440 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 NUDT18Q6ZVK8 323 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 DDX50Q9BQ39 737 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 C11orf70Q9BRQ4 267 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CENPHQ9H3R5 247 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 ASNSD1Q9NWL6 643 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 ZNF862O60290 1169 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 F2P00734 622 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 FAM200BP0CF97 657 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 UCHL3P15374 230 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CDK17Q00537 523 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 PURAQ00577 322 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 TAP1Q03518 808 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 PSMD6Q15008 389 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CFAP221Q4G0U5 840 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 PASD1Q8IV76 773 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 DHX38Q92620 1227 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 ZNF512Q96ME7 567 aaPredicted RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 MED15Q96RN5 788 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 CCDC77Q9BR77 488 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 DESI2Q9BSY9 194 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 FAM105AQ9NUU6 356 aa8.29□□□□□ -1.08
LRP6-206ENST00000543091 LSM7Q9UK45 103 aaKnown RBP8.29□□□□□ -1.08
LRP6-206ENST00000543091 AKAP11Q9UKA4 1901 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 FAM170AA1A519 330 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 TLL1O43897 1013 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 ZNF18P17022 549 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 PSMA2P25787 234 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 DHX40Q8IX18 779 aaKnown RBP8.28□□□□□ -1.08
LRP6-206ENST00000543091 ADGRF2Q8IZF7 708 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 KIAA0895Q8NCT3 520 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 DNAJC19Q96DA6 116 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 TSNARE1Q96NA8 513 aa8.28□□□□□ -1.08
LRP6-206ENST00000543091 ACO2Q99798 780 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms